Vitis vinifera (wine grape): 100262013
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Entry
100262013 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100262013
KO
K13146
integrator complex subunit 9
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100262013
Spliceosome [BR:
vvi03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
100262013
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
100262013
NCBI-ProteinID:
XP_019073367
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Position
13:join(25664708..25664716,25664791..25665150,25665408..25665622,25667129..25667455,25667613..25667820,25668071..25668163,25668274..25668365,25669689..25669806,25669972..25670057,25670784..25670835,25670986..25671507)
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AA seq
693 aa
AA seq
DB search
MKFTCLSKGGNFYFPPCHIITVSGFRILLDCPLDLSSLMIFSPIPTHAFSNPELPSPDSV
DQKRQKHERPIDSSELIRAQPWFKTVTSLHLWNVPFIDVVLISSPMGMLGLPFLSRVNGF
RAKIYVTEVTARIGQLLMEDLVLMNKEFRQFYGCEESGLPQWMNWEKLESLPSLFREIVL
GEDGVELGGWMPLYSADDVKGCMQKVHTLKYAQEVCYNGTLIIKAVSSGLEIGTCNWTIN
GPKRNIACLSSSIFNSSHAMNFDYHALRGNDLIIYSDLSSPVLEDVKDNSCYSAPTSQKS
STLSADNDQEASAELLLSTSESLEEMEKLNFICSCIIDSVKAGGSVLIPIGRLGIILQLL
ELISLSLEASSLKVPIFIISSVAEELLAFTNIIPEWLCKQRQEKLFSGEPFFAHTQLIKE
KKLHVFPAVHSPNLLKIWQEPCIAFSPHWSLRLGPVVHLLRRWSGDENSLLIMEEGVDAD
LALLPFKPMAMKVLQCSFLSGIKLQKVQPLLKILQPKFVLFPEDLRQLVSYSDTNSHAFF
YYCENETLPVPSLKNSSELEIAADLVSLIHCRRLTAESIGIGRLKGDFSVTHGKHQLHSG
SEQADSSQSRPPLLHWGSLDLERLLAVLEKMGIRGSVEQGNSDTDSENARVVHVYEPNKA
LIEVRENSTIISASNESLSSLIFEAVDGILSGL
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttacatgtctcagcaaaggtgggaatttctacttcccaccgtgccatatcatc
actgtatctgggtttcggatcctcctcgattgccccttggacctctcttccctcatgata
ttctctcctattcccacacatgctttttcgaaccctgaacttccgagtccggattctgtg
gaccagaaaaggcagaagcacgaaagacccattgattcaagcgagttaattcgtgcacag
ccttggttcaaaactgtaacctccttgcatttgtggaatgttcctttcatcgatgttgtt
ttgatttccagcccaatgggtatgcttggactgccgtttttgagtagagttaatggcttt
cgtgctaagatatacgttactgaggttacagcaagaattgggcagctgctgatggaggat
cttgttttgatgaataaggaatttaggcagttttatgggtgtgaggagtctggtttgcca
caatggatgaactgggagaagcttgagtcgcttccttcattgtttagggagatagttttg
ggtgaggatggggtggagcttggtggttggatgcccttgtatagtgcagatgatgttaaa
ggttgcatgcagaaggttcatacgcttaaatatgctcaagaagtctgctataatggcaca
ttgatcataaaggcagtcagctctggcttagaaataggcacatgtaattggactataaat
ggtccaaaaagaaatattgcatgtctttcaagctctatcttcaattcttctcatgctatg
aactttgattatcatgctcttcgaggtaatgatctaatcatatattcagatctttcatcc
cctgtcttggaagatgtcaaggacaacagctgttactctgcaccaactagtcagaaatcc
tcaactctcagtgctgataatgatcaggaagcatctgctgaattgttgcttagtaccagt
gagagtttagaggagatggagaaactaaatttcatatgttcctgcattatagattctgtt
aaagctggaggttctgttcttattcccattggtcggctaggtatcattctgcagcttttg
gagctgatatcactttctcttgaagcttcaagtttgaaggttcccatatttattatatct
tctgtagcagaagaattattggcattcacaaatatcatacctgaatggttatgcaagcag
cgacaagaaaagctattttctggtgaaccattttttgcacatacacagctcataaaggag
aaaaagcttcatgtatttcctgcagttcattcacctaatctattaaaaatttggcaggaa
ccgtgcattgcattttctccacactggagcctgcggcttggtcctgttgttcatttgctt
cgacggtggtctggagatgaaaactctttacttataatggaggaaggagtagatgcggat
ctagctctcttacctttcaagccaatggcaatgaaggttcttcaatgctcatttctttca
ggaataaagttgcaaaaagttcaacctttgctgaagatattgcagccaaagtttgttctg
tttcctgaggatttgagacagctggttagttattcagacacaaactctcacgcattcttt
tactactgtgaaaatgaaacattgcctgtgccaagcttgaaaaacagttcagaattagag
attgcagcagacttggtctccctgatccattgcagaagattaacagcagaaagcataggc
attggaagattgaagggagacttctctgtaactcatggtaaacatcagctacattctgga
agtgagcaggcagactcttcacagagtaggccaccattgctgcattggggttcactcgat
ctggaaaggcttctggcagttttagagaagatgggcattagaggatctgtagaacaaggc
aatagcgatactgactcggaaaatgcacgtgttgtacatgtctatgagcctaacaaggca
ctgatagaagtccgagaaaacagtactattatcagtgcttctaatgagagcttatcatcc
ctcatctttgaggctgtagatggcattttgtctggcctttaa
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