Vitis vinifera (wine grape): 100262215
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Entry
100262215 CDS
T01084
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SINAT3
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100262215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100262215
Enzymes [BR:
vvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100262215
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
100262215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-C3HC4_3
zf-RING_6
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
100262215
NCBI-ProteinID:
XP_059598936
LinkDB
All DBs
Position
15:join(20643130..20643228,20652240..20652626,20652831..20653171)
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AA seq
275 aa
AA seq
DB search
MGNRVADLHSLTKFQEILKCSVCFDFMQSPIYQCHNGHTLCSSCKARVLNKCPTCRHQLG
DIRCLALEKMAESLQLHCKYEEFGCPEIIPYHTKLMHEDSCNFRPYSCPWYGCPCSAVGD
IPLLVSHLTDYHKAVMLYGCKFELEFLIEDLYKCQSYKWDVTIINCFDKHFCLHAEAFLI
GSTPVYMAFLSLIGNQAEAGNYSYSLEIGGNGRKLTFEGIPRSIRESKRSSLESADSLIV
LGGMAXFLRRGDENAHASGFRSDMESPDSRIKLVD
NT seq
827 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaccgcgtcgcagatcttcactccctaaccaagttccaggagattctcaagtgc
tccgtttgcttcgactttatgcagtctccaatttatcagtgccacaatggacacacactc
tgttcaagctgtaaagcaagggtactcaacaaatgtcccacttgtaggcaccagctcggt
gatataaggtgtctagctctggagaagatggccgaatcacttcaactgcattgcaagtat
gaggagtttggatgccctgagatcatcccttaccacaccaagctcatgcatgaagactcg
tgtaacttccggccatacagctgcccatggtatggatgtccgtgctctgctgttggggat
attccactccttgtttctcacctgacagattatcacaaggcagtcatgctctatggctgc
aagttcgaacttgaatttttgatagaagatctctataaatgccaaagctacaaatgggat
gtaactatcatcaattgttttgacaaacacttctgtctccatgctgaagccttccttata
gggtcgactcccgtttacatggcattcctcagcctgataggcaaccaagcagaggccggc
aactacagctacagcctggagataggtggaaatgggcggaagcttacttttgagggcatc
ccacgaagcattagagagagtaagaggagtagcttggagagtgcagacagcctcattgtg
ctgggaggcatggcgttttccttaggaggggagacgagaatgcccatgcttcgggtttta
ggtcggatatggaaagcccagattccaggataaaattggttgattga
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