Vitis vinifera (wine grape): 100262218
Help
Entry
100262218 CDS
T01084
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100262218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100262218
Spliceosome [BR:
vvi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100262218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
100262218
NCBI-ProteinID:
XP_002263653
LinkDB
All DBs
Position
1:complement(join(9211503..9211610,9216011..9216086,9216329..9216431,9216759..9216829,9216919..9217811,9218535..9218672,9218907..9218972,9220256..9220270))
Genome browser
AA seq
489 aa
AA seq
DB search
MSEFKAALSDPFLADLEELSDNEADLANEDDMGVGNMEEDDDGEMADIEALNYDDLDSVS
KLQKTQRYIDIMQKVEDALEKGSDMSNHGIVLEDDPEYQLIVDCNALSVDIENEIVIIHN
FIRDNYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTT
SGKPLPEENLKKTVDACDRALALDLAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGT
AGGLTALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPSLRMRACRL
LAAKSTLSARVDSTRGDPTGKTGRTLREEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKR
GGRRLRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGNGKLRVSVGQS
KLAAKVAKKFKEKQYGSSGATSGLTSSLAFTPVQGIELSNPQAHANQLGSGTQSTYFSEI
GTFSKIKRT
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagttcaaggcagctctttctgatcctttcctggcagatttggaggaattgtca
gacaatgaagccgatcttgctaatgaagatgacatgggtgttggaaacatggaagaagac
gatgatggggagatggcagatattgaagctcttaattatgatgatctggacagtgtctcc
aaattacagaaaacacaacgttacattgacattatgcagaaagttgaagatgcgctagag
aaggggtctgatatgtcaaatcatgggatagttttggaagatgatcctgaataccagttg
atagtggattgcaatgcattgtcagttgatattgagaatgaaattgttattatccacaac
tttatccgtgataactaccgtttgaaatttccggaacttgagtcacttgtgcatcaccca
attgattatgctcgagttgttaagaagattgggaatgaaatggatttaacccttgttgac
ctcgaggggcttttaccttcagctatcattatggttgtttcagttactgcatcaactact
agtggcaagccacttccggaggaaaaccttaaaaagacagttgatgcatgtgacagagct
cttgctctagatttagctaagaaaaaggtccttgattttgtagaaagcagaatgggttat
attgcgcccaatctttctgctatagttggcagtgctgttgctgctaaacttatggggact
gctggtggtctcacagcattagctaagatgccagcctgtaatgttcagcttcttggtgcc
aagaaaaagaaccttgcagggttttctactgcaacatcccaatttcgggtaggttatatc
gagcaaacagagatatttcagagcacacccccttccttgaggatgcgagcctgccggctt
ttggctgcaaaatcaacactttctgcacgagtagattctacaaggggagatcctacaggg
aaaactggaagaaccttgcgagaagagatccttaagaagattgagaaatggcaagagcca
cctcctgcaaaacaacctaaacctcttccagttcctgattctgagcctaaaaagaagaga
ggtggtcgtcggctaaggaagatgaaggagaggtatgctataacggacatgaggaagctg
gccaataggatgcaatttggtgttcctgaagagagttctttaggggatggactgggggaa
ggatatggaatgctcggtcaggctgggaatgggaagttgcgtgtatcagttggtcagagt
aaacttgctgccaaagttgctaaaaagttcaaggaaaagcaatatggaagcagtggtgct
acctcaggactgacttcaagtttggccttcacacctgtgcagggaattgagctgtcaaat
ccccaggctcatgcaaatcagcttggaagtggaacccaaagtacctacttttctgaaata
ggaaccttttcaaagatcaagaggacctga
DBGET
integrated database retrieval system
