Vitis vinifera (wine grape): 100262402
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Entry
100262402 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100262402 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100262402
Enzymes [BR:
vvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100262402
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100262402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
Prok-RING_4
Rtf2
zf-RING_10
zf-rbx1
zf-RING_4
RING_XB3-XBAT31
Zn_ribbon_6
zf-Nse
zf-RING_6
Sina_RING
zf-P11
LIM
zf-Vps39_C
DZR_2
zf-ANAPC11
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
100262402
NCBI-ProteinID:
XP_002263351
LinkDB
All DBs
Position
5:complement(join(17388706..17388933,17400717..17400784,17402042..17402156,17402237..17402488))
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AA seq
220 aa
AA seq
DB search
MSTQDLSEQQNGSERDIEEEETLLLDLNYPPPSDNVALESTFTSSSPLELYAKDQRWSNP
QATNNVDASDDDVVILSSPRSFLEARKNSRRNAEVIMVNDNDIEMPGHLGIVFDDIEMQG
HQEIAQQNKIDTDLKLCLELFNKTETENVQIPTEVPSPETPTFTCPICMDQLTEETSTKC
GHIFCKECIEGAMAVSQRCPTCRKKLKKKDIIRVYLPGKK
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcaagatttatcagagcaacaaaatggctcagagagggacattgaggaggag
gagacattgctcttggacctcaattatccacctcccagtgacaatgtggctctggagagc
acctttactagttctagtcctctagaattgtatgccaaagatcaaaggtggtctaatcct
caagctacaaataatgttgatgcgagtgatgatgatgttgttattttatcctctccaagg
agtttccttgaggccagaaagaattccaggaggaatgctgaggtgataatggtgaatgat
aatgatatagaaatgccagggcacctaggtattgtttttgatgatatagaaatgcaagga
caccaagagattgctcaacagaacaaaatagataccgatttgaagctatgcttggaactc
ttcaacaaaactgagacagaaaatgttcaaatacctacagaagtgccctcaccagagaca
cccaccttcacttgcccaatttgcatggatcaattgactgaagagacatcaacaaagtgt
ggtcacatcttctgtaaggagtgcattgaaggtgcaatggcagtcagtcaaaggtgccct
acttgccggaaaaaacttaaaaagaaagacatcatcagggtctaccttccaggcaagaaa
taa
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