KEGG   Vitis vinifera (wine grape): 100262408
Entry
100262408         CDS       T01084                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X2
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vvi03016]
    100262408
Enzymes [BR:vvi01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     100262408
Transfer RNA biogenesis [BR:vvi03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    100262408
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH zf-CCCH_4 zf_CCCH_4 zf-CCCH_2 DEAD_2
Other DBs
NCBI-GeneID: 100262408
NCBI-ProteinID: XP_002275411
UniProt: D7U5F6 A0ABY9BK93
LinkDB
Position
3:join(702295..702522,703168..703284,703394..703630,704318..704570,704674..704930,705604..705876,706160..706441,706600..706720,707781..707950,708059..708157)
AA seq 678 aa
MDGSSVALVEEAKATERAEKTPGELVAKAIVPVKREFLRPPPLRPCNDVASDSKYTPSTF
VKEKKSKRQLKRERRQEQKSALNICSEIAKTGNVNACPYNEKCRFSHDLEAYKAQKPDDL
EGSCPFTSAEGACPYGLACRFSGTHKDGVAAGNLNLHKKNSEINGLNKDVQKLLWKNKIR
FPKADAKLKLLGLLGKANSKIKTFEDKGEGDLKVSNGTHATNDNSCGELVIDSDNKVEGS
PKMPEEDDVEGFATDEPRPTKKIKSATNEECCTGNADNGASVQEKDLGKSCAQIEPESAT
DNIFSESDGSLKLHPREKKLIDFREKLYLAPLTTVGNLPFRRVCKMLGADVTCGEMAMCT
NLLQGQASEWALLRRHSAEDLFGVQICGAYPDTVARTVELIDQECEVDFIDINMGCPIDI
VVNKGAGSALLTKPMRMKNIIEAASGIVDKPITVKVRTGFLEGRNRVDSLIADIGQWGAN
VVTIHGRSRQQRYSKLADWEYIYQCARKAPEALQVLGNGDIFSYLDWNKHKSGCPELSTC
MIARGALVKPWIFTEIKEQRHWDISSGERLNILKDYVRCGLEHWGSDTKGVETTRHFMLE
WLSYTYRYVPVGLLDVIPQQLNWRPPSYFGRDDLETLMASDSAADWIRISEMLLGKVPPG
FTFAPKHKSNAYDRAENG
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggacgggtcgtcggtagcgctcgtcgaagaagcgaaggctacagagagagcggagaaa
acaccaggagaacttgtcgccaaggccatcgttcctgtgaagagagagttccttcgtcct
ccgcctctcaggccttgtaacgacgttgcttcggactccaagtacactccttcaaccttc
gttaaggagaagaaatccaaacgccagctcaaacgagaacgccgccaggagcaaaaatca
gccctaaatatctgttccgagattgctaagacaggcaatgttaatgcatgtccttataat
gaaaagtgccgcttcagccatgacttggaagcctacaaggctcagaaaccagatgattta
gagggaagctgtcccttcacaagtgctgaaggagcatgcccttatggtttggcttgtaga
ttttctggtacccataaagatggtgttgctgctggaaatttgaatcttcataagaaaaac
tctgaaattaatggactgaacaaagatgttcagaagcttttgtggaaaaacaagataagg
ttccccaaggcagatgctaaactcaaacttcttggtcttctggggaaggccaattcaaaa
attaaaacattcgaagataaaggggaaggtgatctgaaagtttcaaatggtactcatgct
actaatgataatagttgtggtgaattggtcattgactcagataataaagtagagggctct
ccaaaaatgccagaagaggatgatgttgagggatttgcaactgatgaacctagacccacg
aagaaaataaaatctgcaactaatgaggagtgttgcactggaaatgcagataatggtgca
tctgtccaggagaaagatttagggaaaagctgtgcccaaattgaaccagagtcagcaact
gataatattttttctgaaagtgatggtagtctaaaattgcacccacgtgagaagaagctt
attgattttagagaaaagttgtatcttgcacctctaaccactgttgggaatcttcctttc
cgaagggtttgcaagatgttgggagcggatgtaacatgtggggaaatggcaatgtgcaca
aatctcttgcagggtcaagcttcagaatgggcactgctgaggcgacattcagcagaggat
ttgtttggcgtacagatatgtggggcatatcctgatactgtggcacgtactgttgaactc
atagaccaggagtgtgaagtggacttcattgatataaacatgggctgcccaatagatatt
gtcgttaacaagggtgctgggtcagctcttcttacaaagccaatgcgaatgaaaaacatt
atagaagcagcttctggcatagtggacaaacctataactgtcaaggtgcgaacaggtttt
ttagaagggcgaaatcgagttgattcattaattgcagatattggccaatggggagccaat
gtggtaaccatacatggtcgttcacgtcagcaacgctatagcaagcttgctgattgggag
tacatatatcagtgtgcgagaaaagcccctgaagctctgcaagtcctgggaaatggggac
atcttttcatatttagactggaacaagcacaagtcaggctgtcctgagctttctacatgc
atgattgctcgaggggctttagttaagccttggatatttaccgaaatcaaggaacagaga
cactgggatatcagttctggggaaaggttaaatattttgaaggattatgttcggtgtggc
cttgaacattggggttctgacacaaaaggagttgagacgacgaggcatttcatgctggaa
tggcttagctacacatacagatacgtccctgttggtctgttagatgttatcccacaacag
ctgaactggcggccaccctcctactttggccgcgatgaccttgagactctaatggcctct
gattctgcagctgactggattcgaatctctgagatgttgcttggcaaggttcctccaggc
ttcacatttgcaccaaagcacaaatccaatgcttatgacagagcagaaaacggttaa

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