Vitis vinifera (wine grape): 100262670
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Entry
100262670 CDS
T01084
Name
(RefSeq) serine/arginine-rich splicing factor RS41 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100262670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100262670
Spliceosome [BR:
vvi03041
]
Common components
Common spliceosomal components
SR proteins
100262670
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RNA_bind
DbpA
SET_assoc
DUF2129
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
100262670
NCBI-ProteinID:
XP_002273751
LinkDB
All DBs
Position
15:join(19022297..19022402,19024019..19024131,19024406..19024641,19024958..19025224,19025371..19025407)
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AA seq
252 aa
AA seq
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MKPIFCGNLEYDARQSDVERLFRRYGKVDRVDLKSGFAFVYMDDERDAEDAIRRLDRTVF
GRKGRQLRVEWTKQERGIRRPGGSRKSSANMKPSKTLFVINFDPIHTRTRDLERHFDLYG
KILNIRIRRNFAFIQFESQEDATKALDATNMSKFMDRVISVEYAARDDDDDRRNGYSPER
RGRDMSPDRRSHDRGRSPSPYHRDRASPDYGHGANANSRSEPRGSPNYDRDESPVNERYH
SRSPPPRERSRS
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccatcttttgtggcaaccttgagtatgatgcacgtcagtctgatgttgagcga
ctgttcagaagatatgggaaggttgatagggtggatctgaagtccggatttgcttttgtt
tatatggatgatgaacgagatgcagaggatgcaattcgaagacttgacaggacagtattt
ggcagaaaggggcgtcaacttcgtgttgaatggacaaagcaagaacgagggattagaagg
cctggtggttcaagaaaatcttcagctaatatgaaaccctcaaaaaccttgtttgtgatt
aattttgatccaattcatactcggaccagggatctggagaggcactttgacctatatggg
aaaatattgaacataaggatcagaaggaattttgcattcattcagtttgaatcacaggag
gatgccaccaaagcattggatgcaacaaacatgagcaagttcatggatcgggttatttca
gtagaatatgcggctcgagatgatgatgatgatagaagaaatgggtatagccctgaaaga
agaggacgtgacatgtctcctgataggagaagtcatgatcgagggcgatccccaagtcca
taccatagggatagggctagcccagactatgggcatggagcaaacgcaaattccaggtct
gaaccgcgaggaagccctaactatgacagagatgaaagcccagtcaatgagagataccac
agccgatcacccccaccacgtgaaagatcccgatcttga
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