Vitis vinifera (wine grape): 100262691
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Entry
100262691 CDS
T01084
Name
(RefSeq) WD repeat-containing protein RUP2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04120
Ubiquitin mediated proteolysis
vvi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100262691
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
100262691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100262691
Enzymes [BR:
vvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100262691
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100262691
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100262691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_DCAF4
EIF3I
WD40_like
Beta-prop_TEP1_C
YNR034W-A-like
Motif
Other DBs
NCBI-GeneID:
100262691
NCBI-ProteinID:
XP_002267663
LinkDB
All DBs
Position
16:21816330..21817478
Genome browser
AA seq
382 aa
AA seq
DB search
MKNFSTQFNPQSPEVENPNIQEEKAEQHIEEERARCDWEFNLSTVVTSSSTGASTDTIGV
IEFDPSDNLVATGGIARKIRVYSVKSLLPGENHSHGEHNVKLLQHNNACDYYIWTPAKLS
SLRWKPGSSGRVLGSGDYDGVVTEYDLDRKIPIFERDEHGGRRIWSVDYSHWNPFVGASG
SDDGTIQMWDPRCEGTTNVAKVRPSAGGGAVCCVEFNPFGGPLVAVGCADRRAYGYDVRK
MVDPVLIFDGHQKPVTYVRFLDEHMMVTSGTDGCLRLWSMHDARMIRVYMGHMNTRNFVG
LSVWRTGGLLGCGSENNHVFVYDKRWSEPIWVHEFGGGSRDGCDPKFVSSVCWRQVGKDV
CTLVAGGSDGSLQVILGKRRAF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacttctcaacgcaattcaatcctcaaagcccagaagtagaaaacccaaacata
caagaagaaaaggcagaacaacacatagaagaagaaagagctaggtgcgactgggaattc
aatctctccactgttgttacctcgagctccaccggagccagcactgacaccatcggcgtc
atagagttcgacccctctgataacctcgtggccactggaggaatcgctcggaaaattaga
gtttatagtgtaaaatccttgttgcccggcgaaaatcatagccatggtgagcacaacgtt
aaattgttacaacacaataatgcatgtgactactatatatggaccccggctaagctcagt
agcctaaggtggaaaccgggctcctccggccgagtactcggctccggcgactacgatggg
gtggtcaccgagtacgacctcgaccggaaaatccccattttcgagcgagacgagcacggt
ggacgtcgaatatggagcgtggactactcacattggaatccgtttgtgggtgcgtcgggg
tctgacgatggcaccatacaaatgtgggatccacgttgcgaaggaacaacgaatgtagcg
aaagtacgacccagtgcgggcgggggcgccgtgtgttgtgtggagttcaaccccttcggc
ggtccattggtcgccgtcgggtgtgcggaccgaagagcctacggctatgacgtgaggaag
atggtcgacccggtactaatattcgacggacaccaaaaaccggtgacctacgtgcggttc
ctggatgagcatatgatggtaacgtcagggacggatgggtgcttgaggctttggagtatg
catgatgcccgaatgattcgggtgtacatggggcatatgaatactcggaactttgttggg
ttgtcagtatggaggacaggcgggttactgggatgcgggtcggaaaataaccatgtattc
gtgtatgacaagaggtggagtgagcccatatgggtgcatgaattcgggggagggagtaga
gatgggtgtgacccgaaatttgtgagcagcgtgtgttggaggcaagtgggtaaggatgtg
tgcacccttgtggctggtgggtcggatgggagtctgcaggtgattttggggaagaggagg
gcattttga
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integrated database retrieval system
