KEGG   Vitis vinifera (wine grape): 100262719
Entry
100262719         CDS       T01084                                 
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
  KO
K15166  mediator of RNA polymerase II transcription subunit 23
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vvi03021]
    100262719
Transcription machinery [BR:vvi03021]
 Eukaryotic type
  RNA polymerase II system
   Mediator complex
    Other mediators
     100262719
SSDB
Motif
Pfam: Med23
Other DBs
NCBI-GeneID: 100262719
NCBI-ProteinID: XP_010653178
LinkDB
Position
1:join(5135103..5135192,5135304..5135347,5155922..5156021,5156147..5157121,5166167..5166401,5174806..5175023,5175270..5175477,5183194..5183337,5190151..5190431,5191174..5191257,5202328..5202422,5202694..5202856,5202944..5203189,5214148..5214318,5214456..5214569,5214669..5214794,5218955..5219103,5229804..5230044,5230173..5230947,5234292..5234473,5235635..5235738,5235853..5236054)
AA seq 1648 aa
MDPNPRPSSRAYQLHPARSSIVDLFNLYLGRSSHQKPEDSNREPPNKTQKRVTALNRELP
PRNEQFLLDFGQLQSQFSDQDQLRSVTESILISLVVPCSGHAPRAEFLLFALRSLCSIGY
INWDTFLPSLLSSVSSAEMSVGQGNQAVTSVSSTSLSPSGMLPSSSTIHNSSTFQSSNPA
SPLPSVHGISSPAQSATDPSPCVALSPVKSSDISCSGQQSTMRVNSTIRDNTLSCLRQLC
CKIILTGLDFNLKPVTYAEIFNHMLNWLVNWDQRQQESDVAKSWRPDKALIEWLHSCLDV
IWLLVEEDKCRVPFYELLRSGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLQ
CPTFGTHRFLSQTTSPISGEAVANLRYSPIMYPSVLGEPLHGEDLANSIQRGSLDWERAL
RCIRHALRTTPSPDWWKRVLLVAPCYRSHPQGPSAGAVFTSEMICEATIDRIVELLKLTN
SDINCWQEWLVFSDIFFFLMKNGCIDFVDFVDKLILRLIEGDNHILRTNHVTWLLAQIIR
VELVMNALTSDPRKMETTRKILSFHKEDRSSDPNNPQSILLDFISSCQNLRIWSLNTSTR
EYLNNEQLQKGKQIDEWWRLANKALTGSSIGVATCTSGALLGGTTGVGSEGVAGSFSGMG
KTKVDSSTTTTGERMMDYVTLDDRSIGMFWVMSYTMAQPACDTVMNWFSSAGAAELIPGS
HLQSNERVMVMKEISPLPMSLLSGFSLHLCMKLAFQMEDSLFSGQVVPSIALVETYTRLL
LIAPHSLFRSHFSHLSQRYPAILSKPGATLLVLEILNYRLLPLYRYQGKGKTLMYDVTKI
VSALKGKRGDHRAFRLAENLCMNLILSLRDPFQVKKEGKGPTEFTETLNRITIITLAIII
KTRGIAEADHLPYLQTMLEQIMATSQHTWSEKTLRYFPSLLREAMIGRIDKKNLAIQAWQ
QAETTVIAQCTNLLLSSGDPSYVMTYISHSFPQHRRYLCAAACMLMHGHPDNINVANLAR
VLREFSPEEVTSNIYTMVDVLLHHIHMELQHGHSLQDLLSKACANLAFFIWTNELLPLDI
LLLALIDRDDDSHALRIVISLLDKQELQQRVKLFCNNRGSPEHWLCSGMFKRADLQKALG
NHLSWKERYPVFFDDAAARLLPVIPLVVYRLIENDATDQADRVLAMYSQLLAYHPLRFTF
VRDILAYFYGHLPGKLTVRILNILDLGKIPFSESFLKHMSSSNPVICPPLDYFATLLLGL
VNNVIPPINTNSKSGSMGDTSNNTLRAPHNKTPAASQSGPTNASEGQKSFYQTQDPGTFT
QLVLETAVIEILSLPVPATQIVSSLVQIIVHIQSTLIQSSNGLHGPPNGVGQGSVLPTSP
SGGSTDSLSASRSSASVSGINASNFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHKQLY
IEASCLIKESWWLTDGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHAFFSNL
PQEWLEGTHLIIKHLRPVTSVAMLRIAFRIMGPLLPRLSNAHSLFNKTLSLLLNTMVDVF
GRNSQPATPVEASEIADLIDFLHHAVHYEGQGGPVQASSKPRPEVLALCGRASESLRPDI
QHLLSHLKTDINSSIYAATHPKLVQNPS
NT seq 4947 nt   +upstreamnt  +downstreamnt
atggatccgaacccgagaccatcttctagggcttaccagcttcaccctgcccgatcctcc
atcgtcgacctcttcaatctttacttaggaagaagttcccaccaaaaacctgaggattca
aatcgggaacctccgaacaagacacaaaagcgtgtaactgctctaaacagagagcttcct
cctcgaaatgagcagtttcttttagattttgggcagctccagagccagttttctgaccag
gatcaattgcgttcggtgacagaatctatccttatatctctggttgtgccttgtagtggt
catgcaccacgggctgaatttcttctctttgctttacggagcttgtgcagcataggatac
ataaactgggacacgtttttgccatcccttctttcctcagtttcttctgcagagatgtca
gttggtcaggggaatcaagcagtgacttctgtctcatctacgagtttgtcaccatctggg
atgttgccatcttcaagcacaattcacaattcttccacttttcagtcatcaaatcctgca
tcaccattgccttcagttcatggtatcagctctcctgcgcagtcagcgactgatccatca
ccttgtgtggccttgtcacctgttaaatcctccgatatttcctgcagtggacagcagtct
actatgagggttaattcaaccataagagacaatactctaagctgtctacgccagctttgt
tgtaagattattttaaccggcctggactttaatttaaagccggtgacttatgctgaaatt
ttcaatcacatgctgaactggctggttaattgggaccaaagacaacaggaatctgatgtt
gcaaaatcatggagacctgacaaggctctaattgaatggctgcatagttgtttggatgtg
atttggctgttggttgaggaggataaatgtcgtgtacccttctatgaattactccgcagt
ggcttgcagtttatagaaaacataccagatgatgaagccttatttacacttatcttggag
atccataggaggagagatatgatggctatgcacatgcaaatgctagatcaacatcttcag
tgccctacatttggaactcatcgttttctgtcacagacaacttctcctatttcaggtgaa
gcggtagccaacttgcgatattcaccaatcatgtatccaagtgtgctaggagaacctttg
catggagaggatcttgcaaattctattcagagagggagtctggattgggagagggctttg
cgttgtataagacacgctcttcgaactactccatcacctgactggtggaagcgtgtgctg
cttgtggctccttgttataggtctcatcctcaaggaccttctgctggtgctgtttttact
tctgaaatgatttgtgaggcaacaattgatagaatcgttgaactattgaagttgacaaat
tcagatataaattgctggcaggagtggcttgtattttcagatatattcttttttcttatg
aaaaatggatgcattgattttgttgattttgtggacaagcttattttacgcctgatagag
ggagataaccatattcttcggacgaatcatgttacttggctgcttgcacagattattcgg
gttgagcttgtgatgaatgcattaacctcagaccctagaaagatggagacaactagaaag
attctatcatttcataaagaagatagaagctctgatcctaacaatcctcaaagcatccta
cttgactttataagcagttgtcagaatttacgaatttggtccttgaatacatcaaccaga
gaatatttgaacaatgagcaacttcagaaagggaagcaaatagatgaatggtggagacta
gcaaacaaagctcttacaggaagttcaataggagttgcaacatgcacatcaggagcatta
ttgggtggaacaacaggtgtgggttctgaaggagtagcaggttcgttctcgggcatggga
aaaaccaaagttgattcctcaacaacaacaacaggggaacgcatgatggactatgtgact
ttggatgatagatcaattggaatgttttgggttatgtcttacaccatggcacagcctgct
tgtgacactgtgatgaattggttctcctctgctggagcggcagaattgataccgggatca
catttacagtccaatgagagggtaatggtgatgaaggaaataagcccattgccgatgtca
ttattatctggattttcattgcacttatgtatgaaactggcctttcaaatggaagattct
ttgttttcaggacaggttgtgcctagcattgcactggttgaaacatatactcgattgctg
ctaattgcaccgcactctttatttcgttcacacttcagtcacttgtcacagaggtatcct
gcaatattaagcaagcctggggcgactcttttggtgcttgaaattttgaactaccgcttg
cttccactctacaggtaccaagggaaaggcaaaaccttaatgtatgatgttacaaaaata
gtttctgcacttaaagggaaacgtggagatcatcgtgcatttaggttggcagaaaacttg
tgcatgaatctaattttgtcattgagagacccttttcaagtgaaaaaggaagggaagggt
ccaactgaatttacagaaactttgaatcgtataacaataattactcttgccatcatcatt
aagacacgtggaattgctgaagctgatcacctgccttatctacaaactatgttggaacaa
ataatggcaactagtcaacatacgtggtcagaaaaaactttacgttatttcccttccctg
ctccgtgaagccatgattggacggatagataagaagaacctggcaattcaagcatggcag
caggcagaaacaactgtgatcgcccaatgcaccaatcttcttttatcatctggtgatcct
agttatgtcatgacctacatcagtcatagttttcctcagcaccgacgatatctatgtgct
gctgcatgtatgctgatgcatgggcaccctgacaacattaatgttgcaaacctcgcacgt
gtcttaagggagttttcccctgaagaagtgacatcaaatatttacacaatggtggatgtt
cttcttcatcacattcatatggaactgcagcatggacattccttacaggaccttttatca
aaagcttgtgcaaaccttgcatttttcatttggaccaatgagctgcttcctttggatatt
ttgcttctagcacttattgaccgtgatgatgattcccatgctttacgtattgtgattagt
ctactagacaagcaagaacttcaacaaagagtaaaattattctgtaataaccgtgggtcc
cctgagcattggctttgttctggaatgtttaagcgtgctgatttgcaaaaggcacttggg
aaccatctctcttggaaggaaaggtatcctgtgttctttgatgatgctgccgcacgtttg
cttccagtcattcccttggtggtttataggcttattgaaaatgatgccacagatcaagct
gacagggttctggccatgtattctcaattgcttgcttaccaccctttaagatttacattt
gtccgtgacatacttgcatacttttatggacatcttccaggaaagctcactgtccgaata
ttgaatatacttgatttgggcaagatcccattttctgaatcattcctcaaacacatgagt
tcatcaaatcccgtcatatgcccacctctcgactattttgctactctgttattgggcctt
gtgaataatgttatacctccaataaataccaactcaaaatctggttcaatgggagatact
tcaaataatacactgcgtgcaccacataacaaaactccagcagcatctcagtccggacca
acaaatgcttctgaaggccagaaatcattctatcaaacccaggatcctggtacatttact
cagctggttcttgaaacagcagtcatagaaatactctctctccctgtacctgcaacacag
attgtatcatcacttgtccagatcattgttcatatacaatcgactttaattcagtccagc
aatggtctgcatggaccaccaaatggtgttgggcaaggttcggttttaccaacttcccct
tcaggtggaagcacagattccttaagtgcaagccgatcaagtgcttcagtttcaggaata
aatgcgtctaactttgtttccagaagtggttacacatgtcaacagttatcttgcttgtta
atccaagcttgtggtctgctattagctcagctccctccagattttcacaaacaactctat
atagaggcatcatgtctaataaaagagagttggtggcttactgatgggaaaagatcattg
ggggaactagactctgctgtaggctatgctttgttagatccaacatgggctgctcaagac
aacacctcaacagccattggtaatatagttgccctccttcatgctttcttcagtaacctg
ccacaggaatggctagaagggacgcatctcattatcaaacatctcagacctgtaacatca
gttgcaatgttaagaatagcattccgtataatgggtccattgctcccaagactctctaat
gctcactcactcttcaacaagaccctgtctttgcttttaaatacaatggtggatgtcttt
gggaggaattctcagccagcaactcctgttgaagcatcagaaatagcagatctcattgac
ttccttcatcatgctgtccattatgaaggacagggagggccggtgcaggctagcagcaag
cccagaccagaagttttggctctctgtggaagagcatcagaaagtctgcgtccagatatt
cagcatcttctttcccatttaaaaactgatataaattcctctatttatgctgcaactcat
ccaaagctagtccagaatccctcgtaa

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