Vitis vinifera (wine grape): 100262829
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Entry
100262829 CDS
T01084
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00040
Pentose and glucuronate interconversions
vvi01100
Metabolic pathways
Module
vvi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100262829
Enzymes [BR:
vvi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
100262829
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
PA2794-like_C
Motif
Other DBs
NCBI-GeneID:
100262829
NCBI-ProteinID:
XP_059595532
LinkDB
All DBs
Position
9:complement(join(6463740..6463814,6464186..6464299,6464397..6464505,6464658..6464739,6464845..6465052,6465700..6465795,6466338..6466475,6466879..6466989))
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AA seq
310 aa
AA seq
DB search
MASIGLGKIGLSDDDELSTINVRDFGAIGDGTTDDSQAFLKAWKKACGIQAGYVNFIIES
GKAFLLKPIRFEGPCRASYINIQVLGTITAPKSIYEWGGQSVDNWLIFFRINGLIALSFV
GCNNLKLDHLNLINSPRRHVVIFNINGATISNLNIIAPKESPNTDGIDIGQSTNIQLHYC
NIKTGDDCIAIGPSSFYINISNIACGPGHGISIGSLGLNGRTDKVEEVQVRDCTFTGTRN
GVRIKTWEGGSGYARKILFEGITLNAADNPIIIDQYYCPNNMCSKQHTRKMLFLHIVSMP
MEDLAILFRQ
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcctctattggcttaggcaagattggattaagtgacgatgatgagctctcaactatt
aatgtgcgtgattttggagctattggagatggaactacagatgattctcaggcttttcta
aaagcatggaagaaagcttgtggaattcaggcaggctatgtcaattttataattgaaagt
gggaaggcattcttgttgaagcctataaggtttgaaggtccatgcagagcttcttatata
aatattcaggttttagggacaattactgcccccaaatcaatatatgaatggggaggtcaa
agcgtggacaattggcttattttcttccgtatcaatgggcttatagcattgagtttcgtt
ggttgcaataaccttaaactcgatcatttgaatcttatcaacagcccaaggagacatgta
gtgatattcaacatcaatggtgcgaccatttccaacctcaacataatagcccctaaagaa
agccctaacacagacggtatagacattggccagtcaaccaatatccaactccattactgc
aacattaaaactggtgacgattgtatagctattggtccaagctccttctatattaatatt
agcaacatagcttgcggtcctggccatggcataagtattggaagcttaggattaaatgga
aggactgacaaagtggaagaagtgcaagtaagagattgtactttcactggaactcggaat
ggagtaaggatcaagacatgggagggagggtcaggatatgctaggaagatattgttcgag
gggattacactaaatgccgctgataaccccatcatcattgatcaatactactgtcctaat
aacatgtgctcgaaacaacatactcggaagatgttgtttcttcatattgtatcaatgccc
atggaagatttagcgattctgttccgccagtag
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