Vitis vinifera (wine grape): 100262890
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Entry
100262890 CDS
T01084
Name
(RefSeq) DNA repair protein XRCC2 homolog isoform X2
KO
K10879
DNA-repair protein XRCC2
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100262890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvi03400
]
100262890
DNA repair and recombination proteins [BR:
vvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
100262890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
Motif
Other DBs
NCBI-GeneID:
100262890
NCBI-ProteinID:
XP_002272275
LinkDB
All DBs
Position
7:complement(join(30505842..30505891,30506226..30506262,30506888..30506990,30508505..30508642,30510213..30510275,30511238..30511308,30517487..30517647,30526153..30526300,30530133..30530309))
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AA seq
315 aa
AA seq
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MAARGWICTDESAKEMLSRVSAERSLMLLPPLHRVPLRLGNVVEIAGPSPSAKTQILIQA
AVYCILPKEWRGVHYGGLEHLVMFIDLDCRFDILCLSQSLKHRLMETSGSGNKVNWEQND
DPWGSGTEEPNIGYDEELFAACMRRFLYIRCYDSFEFLATLKTLRYRLQRARETHGVTAH
FLMIDSIGAFYWVDRASTSLHLESNSRKRLSLQSISETVVEEIRKLLLVHPMLVLATKAT
ILGDTYSTNEVKRTSMKLSSNDPSNLRTVTGGPQKLSYREFMPLVWQSFVTHRILVRAAG
WCLRCFVKCICGDMK
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgagaggttggatttgtacggacgagagcgccaaggaaatgctgtctagggtt
tcagcagagcggtcattgatgctcctccctcctctccacagagttcctctccgcctcggc
aacgtcgtcgagatcgccggcccttccccctccgccaagacccagattttgattcaggct
gcagtatattgcattcttcctaaagagtggcgtggcgtgcattatgggggcttggagcat
ttagtgatgttcattgacttggattgtcgctttgacattttatgcctttcacagtcatta
aagcataggctcatggaaactagtggatctggcaataaagtaaattgggaacaaaatgat
gatccttggggctctggtacagaggagccaaatattggttatgatgaggaactatttgca
gcatgcatgagacggttcttgtacatccgttgttatgatagttttgaatttcttgccact
ctcaagacattacgctatcgacttcaaagagcaagagaaacacatggtgttactgctcat
ttccttatgattgacagcattggagcattttattgggtagatcgtgcctcaacatctctg
catctagagagtaatagcaggaaaagactctcccttcaaagtatatcagaaactgtagtt
gaggagatcagaaagctgcttcttgtgcatcccatgcttgtacttgctacaaaagctacc
attttaggggacacatactcaacaaatgaagtcaagaggacttccatgaaattgtcttca
aatgatccctcaaatttaagaactgtaacaggtggtcctcagaaactttcatatcgtgaa
tttatgcctttggtctggcagtcttttgttactcacaggatacttgtacgagcagcaggc
tggtgtcttcgttgtttcgtgaagtgcatttgtggagacatgaaataa
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