Vitis vinifera (wine grape): 100262932
Help
Entry
100262932 CDS
T01084
Name
(RefSeq) polyprotein of EF-Ts, chloroplastic
KO
K02357
elongation factor Ts
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
vvi03012
]
100262932
03029 Mitochondrial biogenesis [BR:
vvi03029
]
100262932
Translation factors [BR:
vvi03012
]
Eukaryotic type
Elongation factors
100262932
Prokaryotic type
100262932
Mitochondrial biogenesis [BR:
vvi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
100262932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_TS
S1
EF-Ts_N
S1_RRP5
RNase_II_C_S1
Motif
Other DBs
NCBI-GeneID:
100262932
NCBI-ProteinID:
XP_019078593
UniProt:
F6HH07
LinkDB
All DBs
Position
11:join(2849316..2851104,2851598..2851882,2852590..2853301,2854135..2854756)
Genome browser
AA seq
1135 aa
AA seq
DB search
MTPVIPSSISNISLISGTAFTSNKNNCLTRCYLLGKSTKQTLSPQRFLLPLSTSVRLFPQ
YRSGCTLHRKSRTHILSATGTDVAVEQSDSPATEDSSGAPEVPSDSAEASEEPSIKSDGG
VTSSQPKRARPRKSEMPPVKNEELVPGATFTGKVKSIQPFGAFIDFGAFTDGLVHVSRLS
DSYVKDVGNIVSIGQEVKVRLVEANTETGRISLTMRDSDDPTKPQQQKDAASSSDKPRPS
RRNTQRSNQRRDEVKKTSKFVKGQDLEGTVKNLNRAGAFISLPEGEEGFLPTSEEADEGF
GNLMGGSSLQVGQEVSVRVLRISRGQVTLTMKKEEDAEKLDLKLGEGVVHTATNPFVLAF
RKNKEIATFLDEREKTVEPAEIPAIPKTSEEIEGKVNQAETVTDILEVQDQPASSDEKSV
SVPSAVDEKVEGDETPSEELDVGASAVDDALNEMASNSEDSESVISNSLQSGDAVQTIEE
KAVVSSEVLASERSISTASQIIEEASATHEVGSDAKSDPSTAIADQILSSESLVGKEVEE
SQSDDTIAKVEVQIETPPIVEPVEEEKVDPTPEKNGSVTSSNGQTDVPSSQESMNTDGSE
DGGKPAPSGELVESQILSSESQDSEKVVENQANDILSKEEVQIQTPAAENEIPSATPVED
EKVETVTAKNNNISNSDGQTGTSSPKESTTKATISPALVKKLREDTGAGMMDCKKALSET
GGDIVKAQEFLRKKGLASADKKASRATAEGRIGSYVHDSRIGILIEVNCETDFVARGDIF
KELVDDLAMQAAACPQVQYLVTEEVPEEIVNKEREIEMQKEDLLSKPEQIRSRIVEGRIK
KRLDELALLEQPYIKNDKVVVKDWVKQTIATIGENIKVNRFVRYNLGEGLEKKSQDFAAE
VAAQTAATPPSAPGKEQPAAVATNDTAEKPPTVTVSAALVKQLREETGAGMMDCKKALSE
TGGDLEKAQEYLRKKGLSTADKKSSRLAAEGRIGSYIHDSRIGVLIEVNCETDFVGRSEK
FKELVDDLAMQVVACPQVQFVSMEDIAESIVSKEKEIEMQREDLQSKPENIREKIVEGRV
AKRLGELALLEQAFIKDDSILVKDLVKQTVAALGENIKVRRFVRFTLGEDIGTEE
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgacacccgtaattccaagttctataagcaacatttcacttatttctggaactgctttt
acttcaaataagaacaattgtttgacaagatgctatcttttgggtaaatccacaaagcaa
acattatccccacaaaggttcctcttacctctctcaacatcagttagactatttccacaa
tacagaagcggatgtactttgcatcgtaaatcaagaacccatatattatcagccacaggc
actgatgtagcagtagagcagtcagattcccctgctactgaggattccagtggagcacca
gaagttccatctgattcagctgaagcaagtgaagaaccctccattaaatcagatggtggt
gtcacttcatctcagcccaaacgtgcaagacctaggaagagtgagatgccacctgtaaag
aatgaggaactggttcctggtgcaacttttacagggaaagttaaatcaatccagccattt
ggtgcatttattgattttggagctttcacagatggcctggtgcatgtttccaggttgagt
gatagctatgttaaggatgttggaaacattgtttccattggacaagaagtgaaagtgaga
ttggtggaagcaaacactgagacagggcggatttcacttaccatgcgtgacagtgatgat
cctactaaaccacagcaacagaaagatgctgcttccagtagtgataagcccagaccttcc
agaaggaacactcaaaggtctaaccaaagaagagatgaggtgaaaaaaacctcaaagttt
gtcaaaggccaggacctagagggcacagtaaagaatttaaatagagctggtgcttttata
tctcttcctgaaggggaggaagggtttttgcctacctctgaagaagctgatgaagggttt
ggaaaccttatggggggctcctcacttcaggttggtcaagaagttagtgtacgggtgcta
cgtatctctagaggacaggttaccttgacaatgaagaaagaagaagatgctgaaaagttg
gatttgaagctcggtgagggagttgttcatactgcaaccaatccttttgtgctggctttc
cgtaagaacaaggagattgctacatttttggatgagagagaaaaaacagtggaaccagca
gaaattccagcgataccaaaaacttcagaagagatagaaggaaaggtaaatcaagctgaa
actgtgactgacatactagaagtgcaggatcagccggcaagcagcgatgagaaatcagtc
agtgtcccatctgcagtggatgagaaggtagaaggtgatgaaactccttcagaggaattg
gatgtgggtgccagtgcagtagatgatgccttaaatgaaatggcaagcaatagtgaggac
tcagaaagtgtgatctctaattcattacagagtggggatgcagtccaaaccatagaggaa
aaagcagtggtgagttctgaagttttggcttctgaaaggagtatatctactgctagtcag
ataattgaggaggcttcagcaacacatgaggtgggaagtgatgcaaaatctgacccatct
acagcaatagcagatcaaatattgtcttcagaaagtttagttggcaaagaagttgaagag
agtcaatcagatgataccatagcaaaagttgaagtccaaatagaaacacctcctattgta
gaaccagttgaagaggagaaggtggatcctacccctgagaaaaatggcagtgtcaccagc
tctaatggacaaacagatgttccttcttcccaggaaagcatgaatacagatggatcagaa
gacggtggaaagcctgcaccatctggagaattagttgagagtcagatcttgtcttcagaa
agtcaggacagtgaaaaagttgttgagaatcaagctaatgatattttatcgaaggaggaa
gtgcagatacaaacccctgctgcagagaatgaaattccttctgccacaccagtagaagat
gaaaaggtggaaactgtcactgcaaaaaacaacaatattagcaactctgatgggcagact
ggcacttcttctcccaaagaaagcacaactaaagccactatatcacctgctcttgtgaag
aagttacgtgaagacacgggagcaggaatgatggattgcaaaaaagctctgtcagaaact
ggaggggatatcgttaaagcccaagagttcctaagaaagaaaggcttagcaagtgctgac
aagaaagctagcagagccactgctgaaggaagaattggttcttatgttcatgatagccga
attggtattctgatagaggtgaactgtgagactgattttgttgctcgaggtgacatcttt
aaggagctagttgatgatctggccatgcaagctgctgcctgtcctcaagtgcagtatctt
gttacagaagaagttcctgaagagattgtcaacaaggaaagagagattgagatgcagaag
gaagatctcttgtcgaagccagaacagatcagatcaaggattgttgaggggcggataaag
aagaggcttgacgagctggcattgcttgagcaaccctacattaagaatgacaaggtggtg
gtgaaagactgggtgaagcagaccattgcaactattggagaaaatataaaagtgaatagg
tttgtgcggtataatcttggagaaggcctggaaaagaaaagccaagattttgctgctgag
gtggctgcccagactgcagcaacgccaccatctgcaccaggaaaagagcagcctgctgca
gtagcaaccaatgacactgctgaaaaaccaccaacggtgacagtctctgctgcattagtc
aaacaactaagagaagaaactggagcaggaatgatggactgcaagaaagctctgtcagaa
actggaggggacctcgagaaggcacaagaatacctcagaaagaagggtctttcaactgcg
gacaagaaatccagcaggcttgcagcagaaggcaggattggatcctacattcatgactcc
cgcatcggagtgctaatcgaagtcaattgtgaaaccgactttgtgggtagaagtgaaaaa
ttcaaggaattggtggatgacttggcaatgcaagttgtggcctgcccacaggtgcagttt
gtttcaatggaggatattgcagagagcattgtgagcaaggaaaaagaaatagagatgcag
agagaggatcttcagtcaaaaccagagaacataagagagaaaattgtggaagggagagta
gcaaagaggcttggggagcttgctcttttagagcaggccttcatcaaggatgacagcatt
ttggtgaaagacttggtgaagcaaactgttgctgccctcggagaaaacataaaagttcgg
aggtttgtccgctttactcttggggaggatatcggaaccgaagaatga
DBGET
integrated database retrieval system
