Vitis vinifera (wine grape): 100263028
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Entry
100263028 CDS
T01084
Symbol
U1-C, U1C
Name
(RefSeq) U1 small nuclear ribonucleoprotein C
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100263028 (U1-C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100263028 (U1-C)
Spliceosome [BR:
vvi03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
100263028 (U1-C)
Complex B
100263028 (U1-C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
100263028
NCBI-ProteinID:
NP_001384754
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All DBs
Position
7:join(2607611..2607618,2607714..2607756,2609388..2609429,2609523..2609808,2610448..2610710)
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AA seq
213 aa
AA seq
DB search
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ
TAAFQQVGAAYNQHLVSFPGNPPRPRLPVLPTPGMPVAGSAPLPMNSPLVPGMRPPVLPR
PVPGAPGYMPAPGMPSMMAPPGAPSMPMPPLNSLPRPPTMNVPPAVPGSTSTPTSGGAPS
MMTQPMYQANPAGPTSGGFDSFNINAQGPEANH
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgccccggtattactgtgattactgtgatacctacttgacgcatgattctccatctgtt
agaaagcagcataatgcaggttacaagcacaaggcaaatgtcagatcctattatcagcaa
tttgaggagcaacaaacccaaagtttgattgaccaaaggatcaaggaacatcttgggcaa
actgcagcattccagcaagttggtgctgcttacaaccaacatctagtttctttcccagga
aatcctccaaggcctcgtcttcctgttcttccgacacctggaatgccggttgcagggagt
gcgcctttacccatgaattcaccacttgtcccagggatgaggcctcctgttctgccaaga
ccagttcctggtgcaccaggttatatgcctgctccaggcatgccatctatgatggctcca
ccaggtgctccttccatgcctatgcccccattaaatagtcttccaaggcctccaacaatg
aatgttccaccagcagttcctgggagcacatcaacacctacttctggtggtgccccctct
atgatgacacaaccaatgtatcaggccaatccagctggaccaacaagtggaggttttgac
agtttcaacatcaatgcccaaggtcctgaggccaatcattag
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integrated database retrieval system
