Vitis vinifera (wine grape): 100263147
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Entry
100263147 CDS
T01084
Name
(RefSeq) protein mago nashi homolog 2
KO
K12877
protein mago nashi
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03013
Nucleocytoplasmic transport
vvi03015
mRNA surveillance pathway
vvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100263147
09122 Translation
03013 Nucleocytoplasmic transport
100263147
03015 mRNA surveillance pathway
100263147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100263147
03041 Spliceosome [BR:
vvi03041
]
100263147
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100263147
Spliceosome [BR:
vvi03041
]
Complex C
Other components
EJC/TREX
100263147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
100263147
NCBI-ProteinID:
XP_003634021
UniProt:
F6I2M2
LinkDB
All DBs
Position
16:complement(join(4580534..4580593,4584795..4584971,4586375..4586593))
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AA seq
151 aa
AA seq
DB search
MATGEDSGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLNPA
VLRECRRIISDSEIMKEDDNNWPEPDNVGRQELEIVMGNEHISFTTSKIGSLIDVQSSKD
PEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaggggaagacagcggagagttctacctccggtactacgttggccacaagggg
aagttcgggcacgagttcttggagttcgagttcaggcccgacggcaagctccgctatgcc
aacaactccaactacaagaacgacaccatgatccgcaaggaggtcttcctcaaccccgcc
gtcctcagggagtgccgccgcatcatctccgacagcgagattatgaaggaagatgataac
aactggccagagccagacaatgtgggcaggcaagagcttgagattgtgatggggaatgaa
cacatatcatttaccacttcaaagattggatcactaattgatgttcagagcagcaaagat
ccggaaggccttcgtatcttctattatcttgttcaggatttgaagtgttttgtattctca
cttatctcgctccacttcaagatcaagccgatataa
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