Vitis vinifera (wine grape): 100263299
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Entry
100263299 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100263299
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100263299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvi03021
]
100263299
Transcription machinery [BR:
vvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
100263299
Prokaryotic type
Archaeal type
TFE
100263299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_ribbon_8
CpXC
HVO_2753_ZBP
Cas12f1-like_TNB
wHTH-PRTase_assc
Zn_ribbon_IS1595
ADK_lid
Zn_Ribbon_TF
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
100263299
NCBI-ProteinID:
XP_059596507
LinkDB
All DBs
Position
11:complement(join(20001790..20001884,20002348..20002555,20002677..20002910,20004124..20004327,20018076..20018259,20018360..20018469,20019978..20020103,20032828..20032948,20033912..20034034,20034173..20034195))
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AA seq
475 aa
AA seq
DB search
MSVEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK
DLKLHSKQLRRTLRFFEEEKLVTRDHRRETAKGAKIYSAAIAATGDGQQTKEGDEKIKLH
THSYCCLDYAQIYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCGKRYNALDALRLISM
EDEYFHCESCNGELVAESDKLASQEIGDGDDNARRRRREKLKDMLQKMEVQLKPLMDQLS
RVKDLPVPEFGSLQAWEARANAAGRAANGDSNANDSSKSSQGLGFGGTPMPFVGETKVEV
AFSGVGVKEEDSKSEIANASLKVLPPWMIKEGMNLTKEQRGEIKQESKMGSSSAPLGSSD
DKKSTTNKDEEKNLQDEYVKAYYAAILKRQQEQEEAAKKQLELSNAHISNSVLGTSSNRQ
VGMKSKRDEDEGDDDFEWEEAPTAGNKSESFKVNDLNVQADASGDDEDDIDWEEG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgaaccattcaataggttggtgaagcttgcagctagagcattttatgacgat
ataacaaccaaaggagacaaccagcccaagactgggaggagtgataaccggggcattgct
gtagtggtgcttgatgctctcacaagacgacaatgggttagagaagaagatttggcaaag
gacttaaagcttcactcaaagcagcttcgtcggactctacgattttttgaagaagaaaaa
ttagttacccgggatcataggagagagacagctaagggtgcaaaaatatatagtgctgca
atagctgccacaggtgatggacaacagactaaggagggagatgaaaagataaagctgcat
actcactcttactgttgcttagattatgcgcagatttatgatgttgtaagatatagattg
catcgtatgaagaaaaaactaaaagatgaactggaggacaagaacacagttcaggagtat
atatgccccaattgtggcaaaagatacaatgctttagatgcactgcgactgatatctatg
gaagatgaatattttcattgtgaaagttgcaatggggaacttgtagcggagagtgacaag
ttagcttctcaagagataggtgatggggatgacaatgccaggaggcggcgacgtgaaaag
ttgaaagacatgcttcaaaaaatggaggtacagcttaagccattaatggaccaactcagc
agagtaaaagatttgcctgttcctgaatttggaagtcttcaagcgtgggaagcacgagcc
aatgctgctggacgtgcagctaatggtgattctaatgctaacgattcctccaaatcttct
caagggctaggatttggtggaacaccaatgccttttgttggagagacaaaggtcgaagtt
gctttttctggtgtcggagttaaggaagaggatagtaaatctgaaattgcaaacgccagt
ttgaaagtcttgccaccctggatgatcaaggaagggatgaaccttacaaaagagcaacga
ggagagatcaagcaagagtctaaaatggggagcagttcagcacctctaggatcttcagat
gacaaaaaatcaaccactaacaaagatgaagagaaaaatttacaggatgagtatgttaaa
gcttattatgctgctatacttaagaggcaacaagaacaagaagaagctgccaagaagcaa
ctggagctgtcaaatgcacatatctccaatagtgttttgggtacatcttctaatcgtcaa
gttggcatgaagtccaaacgggatgaagatgagggagatgatgactttgaatgggaagag
gctccaactgctggcaataaaagtgaaagtttcaaggttaatgacttgaatgttcaagct
gatgcttcaggagatgatgaggatgatatagactgggaagagggttga
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