KEGG   Vitis vinifera (wine grape): 100263448
Entry
100263448         CDS       T01084                                 
Name
(RefSeq) ras-related protein RHN1 isoform X1
  KO
K07887  Ras-related protein Rab-5A
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi04144  Endocytosis
vvi04145  Phagosome
vvi04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100263448
   04145 Phagosome
    100263448
   04148 Efferocytosis
    100263448
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100263448
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vvi04147]
    100263448
   04031 GTP-binding proteins [BR:vvi04031]
    100263448
Membrane trafficking [BR:vvi04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    100263448
 Endosome - Lysosome transport
    100263448
Exosome [BR:vvi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100263448
  Exosomal proteins of other body fluids (saliva and urine)
   100263448
  Exosomal proteins of colorectal cancer cells
   100263448
  Exosomal proteins of bladder cancer cells
   100263448
GTP-binding proteins [BR:vvi04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    100263448
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase Gtr1_RagA MMR_HSR1_Xtn MMR_HSR1 TsaE AAA_16 ATPase AAA_22 AAA_24
Other DBs
NCBI-GeneID: 100263448
NCBI-ProteinID: XP_002284702
UniProt: D7U0K6
LinkDB
Position
9:complement(join(4162003..4162100,4162173..4162266,4162454..4162527,4162891..4162939,4163709..4163876,4163980..4164057,4165211..4165249))
AA seq 199 aa
MARPSNKNIQAKLVLVGDMGTGKTSLVLRFVKGQFFEHQEPTIGAAFFTQLLSLNEATVK
FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDISNVDTFVRAKKWVQELQKQGNKNLVMAL
VANKCDLESKREVNTQEGEKLSEENGMFFIETSAKTSLNINELFYEIAKRLAIAQPSQPS
GMNLHETENSGRRLFCCSV
NT seq 600 nt   +upstreamnt  +downstreamnt
atggcgaggcctagcaacaagaacatacaagccaagctggtgcttgtgggggatatggga
actgggaaaaccagcttggtgttaagatttgtgaaaggccaatttttcgaacaccaggaa
ccaaccataggagcagcatttttcactcagttactatcattaaatgaagccactgtgaaa
tttgacatatgggacacagcaggacaagagcgatatcatagcctggctccaatgtactat
cgtggtgcagcagcagcggttgttgtgtatgacatctccaatgtggatacatttgttcga
gccaaaaaatgggttcaagaactgcaaaaacaaggaaacaagaatttggtaatggcattg
gttgcaaacaagtgtgacttggaatcaaagagagaagtgaacactcaggagggggaaaaa
ctctcagaggaaaatgggatgttcttcatagaaacatcagccaaaacttctctcaacatc
aatgagctcttctatgaaatagcaaagcggctagcaatagctcaaccatcacagccttct
gggatgaatctgcatgagacagaaaacagtggaagaagactattttgttgctcagtatga

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