KEGG   Vitis vinifera (wine grape): 100263736
Entry
100263736         CDS       T01084                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16
  KO
K14810  ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7]
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vvi03009]
    100263736
Enzymes [BR:vvi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100263736
Ribosome biogenesis [BR:vvi03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    100263736
SSDB
Motif
Pfam: DEAD Helicase_C ResIII KRAP_IP3R_bind
Other DBs
NCBI-GeneID: 100263736
NCBI-ProteinID: XP_059594610
LinkDB
Position
7:complement(join(25699895..25699984,25700132..25700346,25700455..25700492,25700912..25700994,25702582..25702719,25703084..25703179,25704020..25704199,25704390..25704455,25705288..25705419,25706497..25706611,25707041..25707141,25707583..25707711,25707820..25707909,25707991..25708149,25708339..25708515))
AA seq 602 aa
MANALERQQGNAERREQEEDEESKTFEELGLEPSLIRALIKKGIEKPTPIQEVAIPLILE
GKDVVARAKTGSGKTFAYLLPLLQKLFSESESRNKLAPSAFVLVPTRELCQQVYSEVLSL
IELCRGQLKVVQLTSSMSPSDLRVALAGPPDILVSTPGCIPKCLSAGVLQAASINESLEI
LVLDEADLLLSYGYEDDLKALTAHVPRRCQCLLMSATSSADVEKLKKLILHNPFILTLPE
VGDGKDEIIPKNVQQFWISCSARDKLLYILALLKLELVQKKILIFTNSIDMAFRLKLFLE
KFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDGSQPKEKEQADEGSQIEPRKSRK
HSKQKLDSEFGVVRGIDFKNVHTVINFEMPQNAPGYVHRIGRTGRAYNSGASVSLVSPDE
MEILEEIKSILGDDENKESNFIAPFPLLTKNAVESLRYRAEDVSKSVTKLAVRESRAQDL
RNEILNSEKLKAHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYLLDPTTQEASKIVKL
ARAAMGNTNPARRQGSRRKFRKSRDPLKTFSAEAPKKAPKGGVKRKEKDNDDSHKHKKKK
AI
NT seq 1809 nt   +upstreamnt  +downstreamnt
atggctaatgctttggagagacaacagggtaatgccgaacgcagagaacaagaagaagat
gaagaaagcaagaccttcgaagaactcgggttggaacctagccttattcgagccctaatc
aagaagggtatcgagaagccgactccaattcaggaagttgccattccactcatacttgaa
ggtaaggatgtggttgctagagcaaagactggttccgggaagacgtttgcgtaccttctt
ccgttgcttcagaagttgttttctgaatctgagtcaaggaacaagcttgctccgagtgcc
ttcgttcttgtgccaacacgagaactctgccagcaggtttattccgaggttttatcgctc
attgagctatgtagaggtcaactgaaagttgtacaattaactagcagcatgtctccctcc
gatttgcgagttgcattggctggaccgcctgatattctggtatctacaccaggttgcata
ccaaaatgcttgtctgcaggtgtcctccaagcagcatccatcaacgaatcacttgagatc
cttgttcttgatgaggcagatcttcttttgtcatatggctatgaagatgatctaaaagca
ctcacagctcatgttcctagacgctgtcaatgcctgcttatgtctgctacttcaagtgct
gatgttgagaagctgaagaagctcattctgcacaatcccttcattttgaccttgccagaa
gtgggagatggcaaggatgagattatccccaaaaacgtgcagcagttttggatttcatgc
agtgctcgtgataagttgctttacatccttgctctcttgaagctagagttggttcagaaa
aaaatactgatatttactaatagtattgacatggcgtttagattgaaactattcctagaa
aagtttggaatcaagtctgctgttttaaatgctgagttgccacaaaattcccgtctgcat
atccttgaggaattcaatgctggactttttgattatctaattgcaactgatggcagccaa
ccaaaagagaaggagcaagctgacgagggcagtcaaattgagccaaggaagtccagaaag
cactccaagcaaaaattggattctgaatttggagtggtgcggggaatcgacttcaaaaat
gtgcatacggttataaatttcgaaatgcctcaaaatgctccaggatatgtacatcgaatt
ggacgtactggaagagcatataatagtggtgcatctgtatctcttgtttctcctgatgag
atggaaattttggaagaaatcaaatctattttgggtgatgatgaaaacaaggagtcaaac
tttattgctccatttcctttgcttactaagaatgctgtggagtccttacgatatagagct
gaggatgtttcaaagagtgtgacaaaacttgctgtaagagaatcccgagcacaggatctg
aggaatgaaattctcaactctgaaaagttgaaagctcattttgaagttaatcaaagagac
ctagacctattgaaacatgacaaggtgcttagcaagaagcccattcctactcaccttcgt
gatgttccagactacctattggacccaacaacacaggaagccagcaaaattgttaagcta
gccagagctgcaatgggaaatactaatcctgctcgcagacaaggatccaggagaaaattc
agaaaaagtagagaccctctcaaaactttcagtgctgaggcaccaaagaaagctcccaaa
ggtggggtgaagaggaaggaaaaagacaacgatgatagccataaacacaaaaagaaaaaa
gcaatctga

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