| Entry |
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| Name |
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X2
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| KO |
| K03131 | transcription initiation factor TFIID subunit 6 |
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| Organism |
vvi Vitis vinifera (wine grape)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:vvi00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100263756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:vvi03021]
100263756
03036 Chromosome and associated proteins [BR:vvi03036]
100263756
Transcription machinery [BR:vvi03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100263756
Coactivators
SAGA/TFTC/STAGA complex
100263756
Chromosome and associated proteins [BR:vvi03036]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100263756
STAGA complex
100263756
TFTC complex
100263756
SAGA complex
100263756
SLIK complex
100263756
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
12:join(5217351..5217476,5218066..5218152,5219630..5219731,5219817..5219925,5220401..5220504,5220600..5220737,5220833..5220928,5221685..5221809,5222731..5222863,5223181..5223306,5223415..5223523,5224198..5224574)
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| AA seq |
543 aa
MSIVSKETIEVIAQSIGIANLSADVALALAPDVEYRMREVMQEAIKCMRHSKRTVLTTDD
VDIALNLRNVEPIYGFTSGGPLRFKRAVGHKNLFYIDDKDLDFKDVIEAPLPKAPLDAAV
VCHWLAIEGVQPAIPENAPVEVIAAPSDGKKFEQKDDGLPVDIKLPIKHVLSRELQLYFD
KIIDLTVNRSDSALFKEALVSLATDSGLHPLVPYFTYFISDEVSRGLNDFNLLFALMRVV
WSLLQNPHIHIEPYLHQLMPSVVTCLVAKRIGNRLADNHWELRDFTANLVASICKRFGHV
YNNLQTRLTKTLLHAFLDPKRSMTQHYGAIQGLAALGPNMVRLLIVPNLEPYLRLLEPEM
LLEKQKNELKRHEAWCVYGALLRATGQSIYDRLKMFPALPSPPARVFRTNGRVVTSPPNK
RKANNEHLEQQPSLKKIATDGPMDVVPTNLSSNMQPPETKGPVPSTDPDMGPSSSSRQIP
HGNISDSRDRKGKGDSRALKMSAVLTQTWRDDLKSGHLLVSLFELFGESILPFIPAPEMS
LFL |
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| NT seq |
1632 nt +upstreamnt +downstreamnt
atgagcattgtgtccaaggagacaattgaggtcatagcacagagcattggaattgccaat
ctgtctgctgatgttgcacttgcccttgctcctgatgtggaatatcgcatgcgtgaggtc
atgcaggaggcaatcaaatgcatgcggcactcaaagagaactgtattgacaacagacgat
gttgatattgcactcaacttaagaaatgttgagccaatttatggctttacctcgggaggt
ccgctgcggttcaaaagagctgttggacataagaatttgttttacatcgatgacaaggat
ttggatttcaaagatgtgattgaagctcctttaccgaaagcaccacttgatgctgcagta
gtttgtcactggctggctattgaaggtgtacaaccagctattccagaaaatgctccagta
gaagtcattgcagctccttctgatggcaaaaagtttgaacaaaaagatgatgggcttcct
gttgacattaaattacccattaagcatgtattgtctagggagcttcagctatactttgat
aaaataattgatctaacggtgaataggtcagactctgccctttttaaagaggcattagtg
agcttggctacagactcaggacttcacccattagttccttattttacatacttcatctcc
gatgaggtatctcgtggtctgaatgatttcaacctcctgtttgctttgatgcgtgtggtt
tggagtcttcttcagaatcctcacatacacatagaaccttatctgcaccaattaatgcca
tctgtggttacctgccttgttgcaaaacgaattggaaatagacttgcagacaaccactgg
gaacttcgagacttcacagcaaacctggttgcttcaatatgcaaaagatttgggcatgtt
tataacaatctgcaaacgcggctgacaaagactctgctccatgcgtttttagacccaaaa
cgttctatgacccaacactatggtgcaattcaaggtttagcagctctaggaccaaatatg
gttcgcctacttatagtgccaaatcttgaaccataccttcgacttcttgaacctgagatg
ctccttgagaagcagaagaatgagctaaagaggcatgaagcatggtgtgtttatggggcc
ttgctgcgtgcgacaggtcaatccatatatgatcggctcaaaatgttcccagctttgcca
tccccaccagcacgtgttttcaggaccaacggaagggtagttacatcaccaccaaataaa
cgcaaggcaaacaatgagcacttggagcagcagccatctctcaagaagatagcgacagat
ggcccaatggatgtggtgccaaccaacttgtcatctaacatgcaaccgccagaaacaaaa
ggtcctgttccttcgactgatcctgacatgggcccatcatcatcttccaggcagatacct
catggaaacatttcagatagcagagatagaaaaggtaagggtgatagtcgagctttgaag
atgtcggctgtcctcacccaaacttggagggatgacttgaaatctgggcatcttctggta
tcgctgtttgagttgtttggtgaaagcattttgcccttcattccagctcctgagatgtct
ttgttcttgtaa |
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