Vitis vinifera (wine grape): 100263874
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Entry
100263874 CDS
T01084
Name
(RefSeq) RNA-binding motif protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100263874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100263874
Spliceosome [BR:
vvi03041
]
Complex A
U1 snRNP components
U1 related factors
100263874
Complex B
100263874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
100263874
NCBI-ProteinID:
XP_019075888
UniProt:
F6HPN7
LinkDB
All DBs
Position
1:join(9119404..9119917,9121390..9121649,9121795..9121947,9122299..9122713,9122896..9123588,9123700..9124289,9130232..9130483)
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AA seq
958 aa
AA seq
DB search
MADPSTTSATVEQNPQQSEPDNPPIQLDAPPAVTPSPSRTTTSLATPVTVNPNSNSQLMS
SVPQPIQQFAPPPISSGGVVLPPAPSFRPAPPPVQMLAPQFSPVPNANLQNSNFQNPNVP
PPGVSPVPVMMSYQIPPPGQPPNPALRPYAPVPNGYPAIPAPGPQGAVPPPGVPRYPSPY
ATMVRPAFPPRPPGAIGMLPALSRPPVPGMPGVRPIMPPVVRPAIVPVAAPTEKPQTTVY
VGKIASTVENDFILSLLQVCGPVKSWKHAQYPIDGTPRGLGFCEFESPEGVLRALRLLTK
FNVDGQELVLNVNQATREYLERYVEKKTENSKKPQESDIEGSEKEQESVPGVEQNEILKP
SLEDSKKDGNELVNKENQDNASFGIVTDEDREADREALEKLTSMMEERIKTKPLPPPPAQ
GAADGSENTNSELPTKSRDSDVDVMRNDAAEDDETTSENKPKSDQERLERSSPDRSRRYD
RRSRERDRDRELKREKEREFDRLERERERERVRREKEREIKIERAENLYRERVKEWEYRE
REKEYQRQHEKEREKERERERRREISNQERDNDEDDSRKRRRRSSEVEEKRKKRQREKEE
DLADRLKEVEEIAETNRRASEEEQQQQQEQQNNAVKLLALHATTGSEKEVLTDETDAQNK
DKAVEQAYEGDSSHQNHIGDGILQNGTGDESAMASLAASDVRQSSNLPARKLGFGLVGSG
KRTAVLSVFHEEEDDDAHKEKKMRPLVPIDYSTEELQAVQPTISGPSPSNLVAAAEFAKR
ITNVKDDKSDIEKERNRRAYDRSSHRDRNDEDINRARDENREKFLDRDRDREHGPEKLRT
PDNKKLLDAKQLIDMIPKTKEELFSYEINWGVYDKHELHERMRPWISKKITEFLGEEEAT
LVDYIVSSTQEHVKASQMLELLQSILDDEAEMFVLKMWRMLIFEIKKVETGLSLRSKT
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccttccaccacttctgcaaccgttgaacaaaatcctcagcaatccgaacct
gataatccgccaattcaattggatgcgccacccgccgtaacaccatcgccctcaagaacc
acgacgtcgttggctacaccggttacagtaaaccctaattccaattcacagctcatgtct
tcggtaccccagccgatccaacagttcgcgccaccgccgatctcgtcagggggcgtcgtg
ttaccgccagcaccttcgttccggccggcgccgccacctgttcagatgctagccccgcag
ttctctcccgtccccaacgctaacttacagaattcgaattttcagaaccctaatgttccg
ccgccgggagtgagtcctgtgccggtaatgatgtcctatcagattcctccgccggggcag
cctccaaacccagctttgagaccgtacgcgcctgtgccgaatggctatcctgctattcca
gcacctggtcctcaaggggctgtgcctcctccgggagttcctcgctatccctctccttat
gcaactatggttcgtcctgcatttcctcctcgtccaccaggagcaattgggatgcttcct
gcactgtcacgccctcctgttccagggatgccaggagttcgtccaattatgcctcctgtt
gttagaccagctattgtccctgttgctgcaccaacagagaaaccacaaaccacggtttat
gttggcaaaatagcatcaacagtggaaaatgattttattctctctctccttcaagtttgt
ggacctgtcaagagttggaaacatgctcaatatcccatagatggaactcccagaggcttg
ggattctgtgaatttgagtctcctgaaggggttctccgtgctttacgcctgctgactaaa
ttcaatgttgatgggcaggaactggtgttaaatgttaatcaagcaacaagagaatatcta
gagcggtatgttgaaaagaaaactgaaaactcaaagaaaccacaagaatctgacattgaa
ggatctgagaaagagcaagaaagtgtaccaggtgttgagcagaatgaaattctaaagcct
tctttagaggactcaaagaaggatggaaatgagttggtgaacaaagaaaatcaagacaat
gcttcctttgggattgtgactgatgaagatagagaagctgatcgtgaggctttggagaag
cttacgagtatgatggaagagaggataaagacaaaaccacttcctcccccacccgcacaa
ggggctgcagatggttctgaaaacacaaactcagaactgcctactaagtcaagagattca
gatgtggatgtaatgagaaatgatgcagcagaagatgatgaaactactagtgaaaacaaa
cctaaaagtgatcaggagaggcttgaaagaagttcacctgacaggagtagaagatatgac
aggaggagcagagagagggacagagaccgggagctaaaacgggaaaaggaacgggaattt
gacagacttgagagagaaagggagcgagaacgagttaggagagagaaggagcgagagata
aaaattgagagggctgaaaatttatatagggagcgtgtcaaggagtgggagtatagagaa
agagagaaagagtatcagcgacagcatgaaaaggagagggaaaaagaaagggaacgggag
cggaggagggaaatctcaaatcaggaacgtgacaatgacgaagatgattccagaaaaagg
aggcgcaggagtagtgaggtagaagagaagagaaagaagaggcaaagagaaaaggaggaa
gacttggctgacagattaaaagaggtggaagaaattgctgagaccaataggagggcaagt
gaggaggagcaacagcagcagcaggagcaacaaaacaatgcagtcaagcttttggctctt
catgcaactaccggaagtgaaaaagaagttctgactgatgaaactgatgcacaaaataaa
gataaagctgttgaacaggcttatgagggtgattcaagtcatcagaaccatattggtgat
ggaatattacaaaacggcactggagatgaatcggccatggcatcgcttgctgcatcagat
gtgcggcagagtagcaatctccctgccagaaaattgggttttggtctagttggttctgga
aagcgaactgctgtcctgtctgtttttcatgaggaggaggatgatgatgcacataaggag
aaaaagatgagacctctggttcccattgattattcgactgaagaattgcaggctgtccaa
cctaccatttctgggccatcaccatcaaatttggttgcagcagcagaatttgctaagcgc
atcaccaatgttaaagatgacaagtctgatatagagaaagaaagaaatagacgtgcttat
gataggtcaagccaccgtgataggaatgatgaggatattaatcgtgccagagatgagaac
agagagaagtttcttgatcgggacagggatcgagaacatggaccagaaaaattgaggact
ccagataataagaagcttttagatgccaaacaattgattgatatgatccctaagactaag
gaggagttattctcatatgagataaattggggcgtgtatgataagcatgagctacatgag
agaatgaggccttggatctcaaagaagattacagagtttttaggagaggaagaagctacg
cttgtggattacattgtatccagcactcaagaacatgttaaggcatcccaaatgctggag
ctacttcaatccatcttagatgatgaagcagaaatgtttgtgctcaagatgtggaggatg
cttatctttgaaattaagaaagtagagacaggtctctctttgaggtcaaaaacttga
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