Vitis vinifera (wine grape): 100264085
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Entry
100264085 CDS
T01084
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
100264085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100264085
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
100264085
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_4
F-box-like
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
100264085
NCBI-ProteinID:
XP_002272850
UniProt:
F6HTW6
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Position
14:join(5736106..5736560,5737828..5738320,5738458..5739255)
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AA seq
581 aa
AA seq
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MGYSFPEEVLEHVLSFIDSDSDRNSVSLVCKSWHDIERWCRRRLFVGNCYAVSPAIAIRR
FPELRSVSLKGKPHFADFNLVPHEWGGYAYPWIAAFAKAYPWLEELRLKRMVVSDEALEL
IAKKFKNFRVLVMYSCEGFSTDGLATIAANCRNLKELDLSESEVDDVSGNWLSQFPDSYT
SLESLNITSLSSEIRFTALERLVGRCPNLKTLKLSHSVPLDLLPNLLQKAPQLVELGSGL
HTKEVHPDLYSKLAGAFSGCKGLKRLCGLRDVVPSYLPTLYPICFGLTSLNLSDAPIQCP
ELIKLVSQCQNLQRLWVLDYIEDTGLIALAESCKDLRELRVFPSDPFGQEPNVSLTEQGL
VSVSAGCPKLHSVLYFCRRMSNVALSTIARNRPNLTRFRLCIIERFRPDYITQEPLDVGF
GAIVEHCKDLKRLSLSGLLTDRVFEYIGSHGKKLEMLSLAFAGDSDLGLHHVLSGCKSLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSACQVSYRACKLLGQKMPRLNVEVIAEQGHP
DSSPDEYPVEKLYIYRTVSGPRSDMPSFVWTMDKNSALRSS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggggtattcgtttcctgaggaggttctagagcatgtgctctcgtttatagactcggac
tcggaccggaactcggtctcattggtgtgcaaatcatggcacgacatcgagaggtggtgc
cgccggcgactatttgttgggaactgctatgccgtgagccctgcgatcgcgatccgtcgc
tttccggagctccgatctgtgtccttgaaaggtaagccccacttcgcggatttcaatctg
gttccgcacgagtggggcggttatgcgtacccatggattgctgcgttcgcgaaggcgtac
ccgtggttggaggagctgaggctgaagaggatggtggtgagtgacgaggcgttggagttg
attgcgaagaagtttaagaattttagggttttggttatgtactcctgtgaaggcttctcc
actgatgggttggcgacgattgcagctaactgcaggaacctgaaagagctggacttgtca
gaaagtgaagtagatgatgtgagtgggaattggctgagccagtttcctgattcttataca
tccctggagtcgcttaatattacttcactaagctcggagattagattcactgccctggag
cgcctggttggtaggtgcccaaatctgaaaactctcaagttgagccattcagtgcccctt
gacctgctacccaacctcctccagaaggcccctcagctagttgagctgggttcaggcttg
cacacgaaggaagtccatcctgatctatattcaaagcttgcaggagctttttcaggctgc
aaggggcttaagagactatgtggtttacgggatgtggtcccttcctaccttccaactctc
taccctatttgctttggacttacatccctgaacttaagtgatgcacccatccaatgccca
gaactcatcaagctggtgagccagtgccagaatctgcagcgcctgtgggtactggattat
attgaagacactggtcttattgcccttgcagaatcttgcaaggacctgcgagaattgagg
gtatttccttctgatccatttggtcaggaaccaaatgtctctttaacggaacaaggcctt
gtatcagtttctgcaggttgccccaagcttcactcggttctatatttttgtcgtcggatg
tccaatgtggccctatctactattgctaggaaccgtcccaaccttactcgctttcgtcta
tgcatcattgaacgcttccgtcccgactatattacccaagaaccactggatgtgggcttt
ggggccattgttgagcactgcaaggatctcaagcgcctttcactttctggtctcctcact
gatcgtgtatttgagtacatagggtcccatggcaaaaagcttgagatgctttccctagct
tttgctggggacagtgatttgggtctccaccatgttttgtcaggatgtaagagcctccgt
aaactggagattagagattgcccttttggtgacaaagcacttttggcaaatgcagcaaag
ctggagacaatgcgatccctttggatgtctgcatgtcaagtgagttacagagcttgtaaa
ctgctaggccagaagatgccaaggttgaatgttgaggtcattgctgagcaaggacatcct
gattcgagccctgatgaataccctgttgagaagctttatatttataggactgtttcagga
ccccgatcagacatgccatcttttgtttggacaatggataagaactcagccttaaggtcg
tcttga
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