Vitis vinifera (wine grape): 100264280
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Entry
100264280 CDS
T01084
Name
(RefSeq) N-glycosylase/DNA lyase OGG1 isoform X2
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100264280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvi03400
]
100264280
Enzymes [BR:
vvi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
100264280
DNA repair and recombination proteins [BR:
vvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
100264280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
HHH_5
HHH_8
Motif
Other DBs
NCBI-GeneID:
100264280
NCBI-ProteinID:
XP_010664185
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All DBs
Position
18:join(2596382..2597100,2597826..2598036,2607003..2607225,2607380..2607414)
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AA seq
395 aa
AA seq
DB search
MHSLKLPPTMKRRRPIPQPPSTPPTPTLLKTLVSNSKPTSNSSKKPMILIKTPQTPPPTT
PISPKWVPLNIAKSELSLALTFPTGQTFRWKQTTPLQYTGVIGSHLISLKHLQNGDVAYL
IHQSPSEENARSALLDFLNVGISLSEMWEVFKASDSRFAELAQYLGGARVLRQDPLECLI
QFLCSSNNNIGRITKMVDFVSSLGNYLGSVGGFDFYEFPSLDRLSMVSEEDFREAGFGYR
AKYIIGTVKALQSKSGGGIEWLASLREMDLQEVVDALSTLPGVGPKVAACIALFSLDQHH
AIPVDTHVWQIATRYLIPELAGARLTPKLCSRVADAFVSKYGKYAGWAQTLLFIAELPSQ
KTILPPKFWAIEENKDTNIKASTTVTRGSSEGIAP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcactcactgaaactgccgccaacaatgaagagaagaagacccattccacaaccgcct
tcaacccctccaaccccaaccctcctcaaaaccctagtttccaacagcaaacccacttca
aactcctccaagaaacccatgatcctcatcaagaccccacaaacgccaccacccacaacc
ccaatatcacccaaatgggtgcctctcaatattgccaaatcggagctctcccttgctctt
accttcccaactggccaaaccttcaggtggaagcaaaccacccctcttcagtacactggc
gtcattggatcccacctcatctccctcaaacaccttcaaaacggcgacgttgcctacctc
attcatcagagcccgtcggaggagaatgccaggtcggctttgttggattttctcaatgtg
ggtatttctctgagcgaaatgtgggaggtgttcaaggcttcggattcgaggtttgcggaa
ttggcacaatatttgggtggtgcaagggtgcttaggcaggacccacttgaatgtttgatt
cagtttttgtgttcatcgaataacaatattgggaggattaccaaaatggtggattttgtt
tcgtcgttgggaaattatctggggagtgttgggggttttgatttttacgagttcccatct
ctggatcggctatccatggtttcagaggaagattttagagaggctggcttcggttacagg
gccaaatacataattggcactgtcaaagctttgcagtcaaagtctggtggaggcatagag
tggcttgcttcccttcgtgaaatggaccttcaagaggtggttgatgccctttccactcta
cctggtgttggtcccaaggtggcagcatgcattgctctcttttcactggatcagcatcat
gccattcctgttgatacgcatgtgtggcagattgctaccagatatctcatccctgagctt
gcaggtgcccgtctgacacctaagctttgcagtcgtgtggcagatgcatttgtgagcaaa
tatgggaaatatgctggttgggcacaaactctactcttcattgctgaattaccttcacaa
aagacaattctaccaccaaaattttgggctattgaggagaataaagacactaacataaaa
gctagtacaacagtcacaagaggttcatccgaaggtatagctccttga
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