Vitis vinifera (wine grape): 100264324
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Entry
100264324 CDS
T01084
Name
(RefSeq) lariat debranching enzyme isoform X1
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100264324
03009 Ribosome biogenesis [BR:
vvi03009
]
100264324
Spliceosome [BR:
vvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100264324
Ribosome biogenesis [BR:
vvi03009
]
Eukaryotic type
90S particles
RNase
100264324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
100264324
NCBI-ProteinID:
XP_002283617
LinkDB
All DBs
Position
18:join(6629362..6629367,6629478..6629594,6630392..6630549,6632091..6632212,6632741..6632934,6635558..6635740,6635837..6635955,6636074..6636213,6637195..6637314,6644960..6645048)
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AA seq
415 aa
AA seq
DB search
MRIAVEGCMHGDLDNVYSTLRYLEEVENTKIDLLICCGDFQAVRNKKDLESLNVPPKYRS
MNSFWKYYSGQEVAPFPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRI
GGLSGIYNERHYHLGHYERPPYNERDIRSVYHVREYDVHKLMQVEEPIDIFLSHDWPCGI
TDHGNWKELVRYKPFFEKEIQERTLGSKAAAELLEKLKPSYWFSAHLHCKFAALVQHGEV
GQVTKFLALDKCLPGRKFLQIVEIETVPGPYEIQYDEEWLAITRKFNSIFPLTIHRANLG
GAQVDMQDCRDWVRSRLLTRGAKPFEFVQTVPCYDPSQSASNSCFSGYHRNPQTELLLQF
LELPYLLDNTLESRDPTHSPMSLISREDYNEDIPIDDMDEMEELAEINDGETKNE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgcagtggaagggtgcatgcacggtgacctagataatgtgtactcaactctc
cggtatctggaggaggttgagaacaccaaaatcgatcttctcatttgctgcggtgacttt
caggctgttaggaacaaaaaggatttggagagtctaaatgtgccaccaaaatacaggagc
atgaactctttctggaagtattactcaggacaagaagttgccccatttccaactatattc
attggtgggaatcatgaagcatccaattacctgtgggaattgtactatggaggatgggca
gcgcctaacatatacttcttggggtttgctggagtagtcaagtttggaaatattcgtatt
ggtgggctctctggaatttataatgaacgtcattatcatttaggacactatgagcgacca
ccttataatgaaagggatatccggtctgtatatcatgttcgtgaatatgatgtccataag
cttatgcaagttgaagaaccgattgatatctttctttcacatgattggccttgtggcatc
actgaccatgggaactggaaggaacttgttcgatacaaacctttttttgagaaagagatc
caggaaagaactttgggaagcaaggctgctgcagaactgctggaaaaactgaaaccttcc
tactggttttcagctcacctacactgcaaatttgctgctcttgttcaacatggggaggtt
ggtcaagtgactaaatttcttgcacttgacaagtgccttccaggtcgcaaatttttgcag
attgttgaaatagaaacagtgccaggaccttatgagattcagtatgatgaagaatggttg
gcaataacacggaagttcaactctatctttcctttaaccatccatcgtgcaaatttgggg
ggtgcacaggttgacatgcaagattgtcgtgattgggtaaggagtaggctactaacaagg
ggggccaaacctttcgaatttgttcaaacggttccttgctatgatccctctcagtctgcc
tccaatagttgcttttctgggtatcatcgcaaccctcaaacggagcttttgttgcaattt
ttagaactgccctatcttctggataacacattagaatcaagagatccaacccacagtcca
atgtcattgatttctagagaggattacaacgaagatattcccattgatgacatggatgaa
atggaagagcttgcagaaattaatgatggagaaaccaagaatgagtag
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