Vitis vinifera (wine grape): 100264349
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Entry
100264349 CDS
T01084
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X3
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvi03400
]
100264349
Enzymes [BR:
vvi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
100264349
DNA repair and recombination proteins [BR:
vvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
100264349
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
100264349
NCBI-ProteinID:
XP_002265926
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All DBs
Position
4:join(21464449..21464556,21464633..21464744,21464947..21465174,21465475..21465560,21466513..21466628,21466873..21466953,21467200..21467400,21468673..21468824,21468913..21469634,21469978..21470049)
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AA seq
625 aa
AA seq
DB search
MKIVTYNVNGLRPRISQFGSLLKFLSSLDADIICVQETKLSRHELTADVVMADGYESFFS
CTRTNSKGRVGYSGVATFCRVKSAFSSTEVALPIAAEEGFTGLLEKSGGFGTGKDEIPVK
AEGLEEFAKDELLKVDSEGRCIITDHGHFVLFNIYGPRADSEDTERIQFKHTFFQILQKR
WETLQQQGRRIFVVGDLNIAPAAIDRCDAGPDFEKNEFRRWFRSMLVECGGPFFDVFRAK
HPDRREAYTCWSSSTGAEEFNYGSRIDHILSSGSCLHQDHCLQDRIFVTCHVKECDILTQ
FKRWKPGNKPRWKGGRSIKLEGSDHAPVFMSLMDIPDVAQHSTPSLSARYVPTVHGFQQT
IASVLMKRQKAEQVKTFEVSSSFSDENITTRSCSEILKRSSQDCCISDLPSGDFLSSSNL
QSEGVIPRLDGPSICSISDSSNRIITASIIRQTKSTPGTVTKKKARQSQCSQLSLKSFFQ
KSSNVKDGVDNAAADASLDQADESKSNQNPNKTSMGDDESKSSKMVELDVSASNQEQGVV
ISGSSPQRDKNDIALVEWQRIQQLMQNSIPLCKGHGEPCVSRLAKKPGPNHGRRFYVCAR
AEGPASNPETNCGYFKWAASKSRHR
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtgacttataacgtgaatggcctaaggccacgcatctctcagttcggctct
ctcctcaaatttctcagttccctcgacgccgacatcatctgcgttcaggagacgaagcta
tcgaggcatgaactgacggcagatgtggtgatggcggatggatacgaatccttcttttct
tgcacccgcacgaacagcaaaggtcgggtgggctactccggtgttgcaacattttgccgt
gtgaagtcagcattttcgagcactgaagtggcgttgccaattgcagcagaagaaggcttc
accggcctccttgaaaagtctggagggtttggaactggaaaggatgaaatccctgtaaaa
gcagaaggtcttgaagagtttgccaaagatgagcttctcaaggttgacagtgagggccgt
tgcattatcacggatcatggtcattttgttcttttcaatatatatgggccccgagctgac
tctgaggatacagaaaggattcagtttaagcacacttttttccagatattacagaaaaga
tgggagactctccagcagcaggggaggaggatatttgttgttggtgatcttaatattgct
cctgctgctatagatcgctgtgatgctggaccagattttgagaagaatgagttcaggaga
tggtttagatctatgctagtggaatgtggaggccctttctttgatgtttttagagcaaaa
catcctgacagaagagaagcatacacatgctggtcatcgagcacaggtgcagaggaattc
aattatgggtcaagaattgaccatattctcagttctgggtcatgcttacatcaagaccat
tgcctgcaagatcgtatctttgttacttgccatgttaaagaatgtgacatattgactcag
tttaagcgatggaagcctggaaacaaacccaggtggaaaggagggagaagcatcaaacta
gaaggttctgatcatgctcctgtttttatgagtttaatggatatccctgatgttgcgcag
catagtactccatctttgtctgctagatatgttcctacggttcatgggttccagcaaact
attgcatcagtattaatgaaaagacaaaaggctgagcaagtaaagaccttcgaggtatca
agttcattttcagatgaaaatattacaactagaagttgcagtgagattctgaaaagatca
tcccaagactgctgtatatctgacctgccttcaggcgactttctgtcttcttcaaatctg
caatcagaaggtgtcattccaagactggatgggccctccatatgttccattagtgattct
tccaatagaattataaccgcctcaataatcaggcaaacaaaatcaacgcctggcacagta
acaaagaaaaaagcaagacaaagtcaatgctcccaactctctctgaagtcatttttccag
aaaagttccaacgttaaagatggtgttgataatgctgcagctgatgcgtcacttgatcag
gcagatgagtcaaagtctaatcagaaccccaacaagacttctatgggtgatgatgaaagc
aagagttcaaagatggtggagttggatgttagtgcatccaatcaggaacaaggtgtggta
atttccggcagttccccgcaaagggataaaaatgatatagctttagtggagtggcaaagg
attcaacaactcatgcagaacagcatacctctttgtaagggccatggtgaaccctgtgtt
tctcggttagctaagaaacctggtccaaatcatggacgcaggttttatgtctgtgctcgg
gctgagggaccagcgtctaatcctgaaacaaattgcggttacttcaagtgggctgcttca
aaatctaggcacagatga
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