KEGG T01084: 100264854

Vitis vinifera (wine grape): 100264854

Entry

100264854         CDS       T01084

Name

(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic

K17600

vacuolar protein sorting-associated protein 54

Organism

vvi Vitis vinifera (wine grape)

Brite

KEGG Orthology (KO) [BR:vvi00001]
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:vvi01009]
    100264854
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100264854
Protein phosphatases and associated proteins [BR:vvi01009]
Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100264854
Membrane trafficking [BR:vvi04131]
Endosome - Golgi transport
  Tethering complex
   GARP complex
    100264854

SSDB

Motif

Pfam:

Vps54 Vps54_N EXOC6_Sec15_N Syndetin_C CENPU

Other DBs

NCBI-GeneID:

100264854

NCBI-ProteinID:

XP_059596285

LinkDB

Position

10:join(16887640..16888485,16896188..16896250,16903881..16903960,16906427..16906544,16909478..16909552,16912152..16912308,16912488..16912576,16920022..16920275,16922867..16923038,16923136..16923219,16923305..16923729,16925409..16925562,16926769..16926850,16930793..16930872,16931771..16931932,16933380..16933447,16934822..16934902,16935019..16935154)

AA seq 1041 aa
MDSQPSQSGRFMAEAATTLGNSETRFGRTTSSSTKSVPDGSSQSLASILNNPLVGKSGVY
SSDSWVGWWSSSTAVSPPEFSPLVSGKASSEVARSDFQPYLASISEPYGRFEDIRNHKSK
ENGELEGFGMSKNGEIQGQGEALMACLREVPSLYFKEDFALEEGATFRAACPFTTASENL
VLQEKLSQYLDVVELHLVKEISLRSNSFFEAQGQLQDLNVKIVEGCSRIRELKETIRLLD
SDLVDSAKQIQELNATRSNLLALQQKLKLILYVNQALSALKLLIASADCAGALDVTDDLQ
HLLDGDELTGLHCFRHLRDRVATSIDSINSILSAEFMRASIHDAGNMDAVILSNAKAGAS
IMTNGKDEDVKLDEEETSNFRDRLLPFIIGLLRTAKLPSVLRIYRDTLTADMKTAIKTAV
AELLPVLVARPLDSDFAPGERMVDADGGGSSLASKLRSLSSESFVQLLGAIFKIVEAHLL
RAAEVKRAIEWIMCNLDDHYAADSVAAAIALGAAVAEAAQESDTQISSFLSYSPQRNAGK
INIQGKTNDAASPSNMSKNFRADVLRENTEAVFAACDAAHGRWAKLLGVRALLHPRLRLQ
EFLSIYNITQEFISATEKIGGRLGYSIRGTLQSQAKAFVEFQHESRMAKIKAVLDQETWV
EVDVPDEFQAIVTSLFSLEPLITGNLVDAQGNTATNYGEVVSSNDASSMVDSGLSNNQPH
IEQNDSIETSADVNAQVKSSSLDSATERSKADVITASAQYNSSNMKERGKSTSHTLIYGG
VGYHMVNCGLILLKMLSEYIDMNNFFPALSSEVVHRVVEILKFFNTRTCQLVLGAGAMQV
SGLKSITSKHLALASQVISFTFAIIPEIRRILFLKVPETRRPLLLSEIDRVAQDYKVHRE
EIHTKLVQIMRERLLVHLRGLPQIVESWNRPEDNDPQPSQFARSLTKEVGYLQRVLSRTL
HEVDVQAIFRQVVIIFHSQISEAFSHLEINTPQARNRLYRDVQHILGCIRSLPSDSLGKS
GTPNSGQLDEFLVKRFGTEAG

NT seq 3126 nt +upstreamnt +downstreamnt
atggattcgcagccttcccaatcgggaaggttcatggctgaagctgcaaccacccttggc
aatagtgaaacccgctttggaagaaccacttcgtcgtccaccaaatctgtcccggacggg
agtagccagagcttggcttccattctcaacaatcctctcgtcggaaaatccggcgtttac
agctccgattcgtgggtcgggtggtggtcctcgtcgacggcggtcagtccgccggagttc
tcgccgttggtgtccggcaaggcctcttcggaagttgctcgatccgattttcagccatac
ttagcctcgatctcggagccgtatggtcgtttcgaggacattcggaatcataagagcaaa
gaaaatggagaattggaaggttttggcatgtcgaaaaacggggaaattcaaggtcagggt
gaggctctcatggcgtgtttgagagaggtaccgtcgctgtatttcaaagaggattttgcg
ctggaagagggcgcgacgttccgggcggcttgcccgttcacgacggcgtcggagaatctt
gttctgcaggagaagctgtcgcagtatttggatgtggttgaattgcatttggtgaaggag
atttctctgcggtccaattcgttttttgaggcgcaagggcaattgcaagacttgaatgtg
aagattgtggaggggtgtagtcggatccgagagctaaaggagactataaggctcttggat
tcggatttagtagattctgcaaagcaaattcaggagttgaatgcgactagaagcaatttg
ctggcacttcaacagaaattgaagcttatactatatgtcaaccaagctctctcggctctc
aaactgcttattgcatctgcagattgtgctggtgctctggatgtcactgatgatctgcaa
catttgttggatggtgatgagcttactggtttgcattgttttcgtcaccttcgggatcgt
gtagcaacttcaatagattctataaacagcattctttcagcagaattcatgcgtgcatct
atacatgatgctggaaatatggatgctgtaattctgtcaaatgcaaaagcaggggcttct
attatgacaaatggaaaggatgaagacgttaagttggatgaggaagaaacttctaatttc
cgagatcgtcttctccctttcattattggattgctgagaactgcaaaactcccatctgtg
ttgaggatatatcgtgatacacttacagctgatatgaaaactgctatcaagactgcagtt
gcagagctgcttccagttcttgttgcccgaccattggattcggattttgcaccaggagag
cgaatggttgatgctgatggtggaggttcatcacttgcaagcaagttgagaagcctatca
tcagaaagctttgttcaacttttaggtgctattttcaagattgtcgaggcacatttactg
cgagctgctgaagtgaaaagggccattgagtggattatgtgcaaccttgatgatcactat
gctgctgattcagttgctgctgcaattgcacttggtgcagcagttgcagaagcagctcaa
gaaagtgatactcaaattagttcttttctgtcatattctcctcaaaggaatgctgggaag
attaatattcagggaaagacaaatgatgcagcaagtccatcaaatatgtcaaaaaatttc
cgagctgatgtattgcgagagaacacagaagctgtttttgcggcttgtgatgctgctcat
ggaagatgggcaaaactccttggtgttcgtgctcttcttcatcctaggttgagattgcag
gagttcttaagcatttacaacatcacccaggaatttattagtgctacggagaagattggt
ggaaggttgggttatagcattcggggaacactacagtcacaggctaaagcctttgttgag
tttcagcatgaatctcgaatggcaaaaataaaggcagtgcttgaccaagaaacatgggtt
gaagtagatgttcctgatgaatttcaggctatagtcacttctctattttctttggaacct
ttgatcactggaaacctagttgatgctcaaggtaatacggcaacaaactatggtgaagtg
gtctcaagcaatgatgcatcaagcatggtggacagtggactgtcaaataatcagccgcat
attgagcagaatgattctattgaaacatctgctgatgttaatgcgcaagtgaaatcttca
tcattggatagtgcaactgaaagaagtaaagctgatgttataactgcttcggcacaatat
aatagtagtaacatgaaggagcgtggaaaatctacctctcatacccttatttatggaggt
gttggttatcacatggtaaactgtggcttaatcttgctgaagatgttgtcagagtacatt
gatatgaataacttctttcctgcactgtcttcagaagttgttcatcgtgttgttgaaatt
ttaaaatttttcaatacacgaacttgtcaacttgttctcggtgctggtgccatgcaggtg
tctggtttgaagtccatcacttctaaacacttggcactggcaagtcaggtcatcagtttt
acatttgctattattccagaaatcaggaggattctttttctcaaagtacctgaaacacga
agaccattattgctctctgagattgatcgagtagctcaggattataaggttcacagggaa
gagatacatacaaagctagttcagataatgagagaaaggttattggtccatctgcgtggg
ttgcctcaaattgttgagagttggaacagacctgaagataatgatccacagcctagtcag
tttgctcgatccctaacgaaggaagttgggtatcttcagcgtgtcttatctcgaactctg
catgaggtagatgttcaagcaattttcaggcaagtggttataattttccattctcaaatt
tcagaagcattttcacacttagagatcaataccccacaagcaaggaacaggctgtatcgg
gatgttcaacacattcttggctgcatccgatcattaccttctgatagtttgggtaaatct
ggtaccccaaactcagggcagcttgatgaattcttggtgaagagatttggtactgaagct
ggttga

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