Vitis vinifera (wine grape): 100264936
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Entry
100264936 CDS
T01084
Name
(RefSeq) replication protein A 14 kDa subunit B
KO
K10740
replication factor A3
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03030
DNA replication
vvi03420
Nucleotide excision repair
vvi03430
Mismatch repair
vvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100264936
03420 Nucleotide excision repair
100264936
03430 Mismatch repair
100264936
03440 Homologous recombination
100264936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvi03032
]
100264936
03400 DNA repair and recombination proteins [BR:
vvi03400
]
100264936
DNA replication proteins [BR:
vvi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
100264936
DNA repair and recombination proteins [BR:
vvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
100264936
MMR (mismatch excision repair)
100264936
DSBR (double strand breaks repair)
HR (homologous recombination)
100264936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_3
Motif
Other DBs
NCBI-GeneID:
100264936
NCBI-ProteinID:
XP_002282394
UniProt:
D7TJ80
LinkDB
All DBs
Position
8:join(18387593..18387851,18388473..18388537)
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AA seq
107 aa
AA seq
DB search
MDTSNPAVFVNMELLRMYVGRKVRAVIQVIRSEGGVIIGKSTDEQQLVIKGTPPSFPLTT
FVEVIGIADSNQSIRAEIWTNFGDTFDTYAYNQLCQLANGEYKHLFL
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atggatacatcaaaccctgcagtttttgtcaatatggagctgctgcgcatgtatgtggga
agaaaggttcgagcagtgattcaggttatacgatctgaaggtggagtcataattggaaaa
tctacagatgaacaacagctggtcataaaaggaaccccaccatcctttcctctaacaact
tttgttgaggtaattggtattgcagacagtaaccaatccatccgggctgaaatatggacc
aactttggtgacacatttgacacgtatgcatacaatcagctttgccaacttgcaaatggg
gaatataaacacttgtttctctga
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