KEGG   Vitis vinifera (wine grape): 100265210
Entry
100265210         CDS       T01084                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100265210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100265210
   03041 Spliceosome [BR:vvi03041]
    100265210
Messenger RNA biogenesis [BR:vvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     100265210
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100265210
Spliceosome [BR:vvi03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    100265210
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 BRAP2 HSP90 RRM_RdRP1_2
Other DBs
NCBI-GeneID: 100265210
NCBI-ProteinID: XP_002271592
UniProt: A5APB9 A0ABY9DZZ7
LinkDB
Position
19:complement(join(9087084..9087599,9087881..9088050,9088183..9088282,9088850..9089013,9089659..9089699,9089875..9089930))
AA seq 348 aa
MGSKSKSDNPHTGDGASPGKIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPR
GFGFITYADPSVVDRVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTVTE
DEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEI
KKAEPKKASNPPPAPAYGSNSRARSFSDGFGGFGSSYGGFDSGFGPGPYRTPGGVGGRLG
GYGGYGSSGSEFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYGGGFSGGYGGSGLGGYGR
GGEGYGNYGGSGYSGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgggttcgaaatcgaaaagcgataatcctcatacaggcgatggcgcgagtcccgggaag
atttttatcggaggattagcgaaagatacgacctatgcgacatttaataagcactttggg
aaatatggagacataactgactctgtgattatgaaagatcggtacacgggccagccaagg
ggctttggatttattacctacgctgatccttcagttgttgacagggttattgaagatacc
catgtcattaatggaaagcaggtcgaaattaaaagaactattccaaaaggctctggacag
tcaaaggatttcaaaacaaagaagatctttgttggtggagtgccatcaacagtcactgaa
gatgaattcaagaattttttctcgaagtatgggaaagttgtggaacaccagattatacgt
gatcatgaaaccaaccggtctcgaggctttggatttataatatttgacagtgaggaagtt
gtagatgaaatgatatccaagggaaatatgattgatatggcgggtactcaggtggagatc
aagaaagctgaaccaaagaaagcctcaaacccaccacctgcgcctgcatatggtagcaac
tctagggctcgttctttcagtgatggctttggtggatttggcagctcatatgggggcttt
gacagtgggtttggccctgggccctataggactcctggaggtgttggcggtaggcttggt
ggatatggtgggtatggtagtagtggcagtgaatttggcggtggttacgggggttttggc
agcagtagtttaggaggttaccgaggtgaatcttcccttggttattctagtcggtttgga
ccctatggtggcgggtttagtgggggttatggaggaagtggtctaggtggatatggccga
gggggtgagggctatgggaattatggcggttcaggctacagtggtggttatgactctggt
cctggagctagttatggcggagcaggtgggctgtatggaaggggaggctatagtggcagt
agtcggtaccatccctatgcaaggtag

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