Vitis vinifera (wine grape): 100265395
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Entry
100265395 CDS
T01084
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vvi04131
]
100265395
04121 Ubiquitin system [BR:
vvi04121
]
100265395
Enzymes [BR:
vvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100265395
Membrane trafficking [BR:
vvi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100265395
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100265395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
CxC4
zf-ANAPC11
zf-Nse
zf-RING_16
DUF1272
Motif
Other DBs
NCBI-GeneID:
100265395
NCBI-ProteinID:
XP_010653661
UniProt:
F6HQR2
A0A438J7X3
LinkDB
All DBs
Position
8:12702681..12703625
Genome browser
AA seq
314 aa
AA seq
DB search
MSSGGNTHWCYRCRRPVRLRGRDAVCPNCNGGFIQELNDMVSISPIDFLGLDTDEDRDRR
FGIMEAFSAFMRHRLAGINQNHDIRGRSGSVPEHGQGFPSLFFGGQIPLRLSDTGGIEVL
WNGPHGIGATRGNVGDYFIGPGLEELFEQLSVNDRRGPPPASRSSIDAMPTIKITQKHLR
SDSHCPVCKDRFELGSEARKMPCNHIYHSDCIVPWLVQHNSCPVCRHELPPQGSSRGHSH
QTSSSGNRSSSYSSNSNGRENGRDNQGRRSAWSLLWPFRSSNSSSHHNETGGSSSATVHE
DIHQQTGYHGWPFD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtggtggaaacactcattggtgttacagatgccggcggccagttcgactccga
ggccgagatgcagtttgtcccaactgtaatggaggatttattcaagaactgaatgatatg
gtgagtattagtccaatagatttccttggactggacactgatgaagatcgtgaccgtagg
ttcggaattatggaagcattctcagcttttatgaggcatagattggcagggataaaccaa
aaccatgatatcagagggagatcgggctctgttcctgaacacggtcaggggttcccatca
ttgttttttgggggtcagattcctcttaggttatctgacactggaggaattgaagttctt
tggaatggaccccatggaattggtgcgacacggggtaatgttggtgactactttataggt
cctggactggaagaattgtttgagcagctttctgttaatgatagacggggtcctcctcca
gcatccagatcttcgattgatgcaatgcccacaattaagatcacacagaaacatcttcgc
tcagattctcattgcccagtttgcaaagacagatttgagttgggttccgaagcaaggaaa
atgccatgtaatcatatatatcattcagattgtattgtcccatggctggttcagcacaac
tcttgtcctgtttgccgccatgaattgccacctcagggatcgagccgtggtcatagtcat
caaacctcaagcagtggaaatagaagtagcagttatagtagtaattccaatggaagggag
aacggtagggataatcagggaagacgaagtgcatggtcgcttttgtggccattccgctca
tctaactctagttctcaccacaacgaaacaggtggaagcagctcagcaactgtgcatgaa
gatattcaccaacagacggggtatcatggatggccttttgattaa
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