Vitis vinifera (wine grape): 100265539
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Entry
100265539 CDS
T01084
Name
(RefSeq) target of rapamycin complex subunit LST8
KO
K08266
target of rapamycin complex subunit LST8
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
100265539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vvi04131
]
100265539
Membrane trafficking [BR:
vvi04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
100265539
mTORC2 complex
100265539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_IFT140_1st
ANAPC4_WD40
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_IFT140_2nd
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
Beta-prop_IP5PC_F
PROPPIN
Beta-prop_DCAF12
Beta-prop_WDR19_2nd
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
100265539
NCBI-ProteinID:
XP_002283718
UniProt:
D7SKF4
LinkDB
All DBs
Position
6:complement(join(5706588..5706715,5706818..5706877,5707060..5707139,5707281..5707375,5707515..5707631,5708097..5708174,5709010..5709079,5709253..5709365,5709457..5709558,5710042..5710149))
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AA seq
316 aa
AA seq
DB search
MAQPSVILATASYDHTIKFWEAESGRCYRTIQYPEFNVNRLDITPNKKYLAAAGNPHIRL
FDINSSGHQPIMSYDSHTNNVTAVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYESRA
AVNTVVLHPNQTELISGDQNGNIRVWDLIANSCSCELVPEEDTAVRSLTVMWDGSLVVAA
NNRGTCYVWRLLRGTQTMTNFEPLHKLQAHSGYILKCLLSPELCDPQRYLATASSDHTVK
IWNVDGFTLEKTLIGHQRWVWDCVFSANGEYLITASSDTTARLWTLSTAEAIRVFNGHHK
ATVCCALNDGPEYLSS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaccatcagtgatcctcgctacggccagctacgatcacacaatcaagttctgg
gaagccgagagtggtcggtgctatcggactattcagtacccagaatttaatgttaatcga
cttgatataaccccaaataagaagtacttggctgcagctggaaatccccacattcgacta
tttgacattaactccagtggtcaccaacctatcatgagctatgattcacataccaacaat
gtcacagcagtggggtttcaatgtgatggaaattggatgtattctggttctgaagatggc
acagtaaagatttgggatttgagggctccagggtgtcaacgggaatatgaaagccgtgca
gctgttaacactgttgtcctgcatccaaatcagacagaactaatatctggagaccaaaat
ggaaatattcgagtttgggatttgatagcaaattcatgcagctgtgaattggtaccagaa
gaagatacagctgtgcgctctctaactgtaatgtgggatgggagcttggttgtggctgca
aataatcgtggaacatgctatgtctggcgcttgttgcgagggacccagactatgaccaat
tttgagccgcttcataaacttcaagcacacagtggctacattcttaagtgtttgctctca
cctgagctctgtgaccctcaacgatatctggctacagcatcatctgatcatactgttaag
atatggaatgtggatggtttcaccttagagaaaactctaattggacaccaacggtgggtt
tgggactgtgtcttttctgctaatggtgaatatctaatcacagcttcctcggatacaaca
gccagactttggacactgtcaaccgcagaagccatccgagtgttcaatgggcaccacaaa
gcaacagtgtgttgtgccctcaacgatggccctgaatatttgtcttcttga
DBGET
integrated database retrieval system
