Vitis vinifera (wine grape): 100265608
Help
Entry
100265608 CDS
T01084
Name
(RefSeq) RGG repeats nuclear RNA binding protein A
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100265608
Spliceosome [BR:
vvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100265608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
100265608
NCBI-ProteinID:
XP_002266051
UniProt:
D7TGB6
LinkDB
All DBs
Position
2:join(6234287..6234473,6236110..6236428,6236565..6236630,6236763..6236895,6238571..6238726,6238824..6238880,6239524..6239697)
Genome browser
AA seq
363 aa
AA seq
DB search
MATTNPFDLLGDDDNDDPSQLASHLLKLAPAKKSSAPPPQAAPAQQAKPAKLPSKPLPPA
QAVRETKNEVGRGGGRGSGRGYGRGRGGAGLNRDSFNNESTLNNNDGFSGGYRPSEEGDT
GKSFERRGSGGPRSPYRGGGRRGGFSNGEVGEGERPRRAYERRSGTGRGNEIKRDGAGRG
NWGTPADEIAPENEEPINETEKNTSAEKQLGEEIAADANKENPVNESEEKEPEDKEMTLE
EYQKVLEEKRKALLALKTEERKVDVKDFEAMQQLSSKKDNDDVFIKLGSEKDKRKELADK
EERAKKSVSINEFLKPAEGERYYGGRGRGRGRGTRGGFAGNTYSNVAAPSIEDPGQFPTL
GGK
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccacaaaccctttcgatctcttgggcgatgacgacaacgacgacccctctcag
cttgcttctcatctgctcaagctcgcgcctgctaagaaatcctcagcgcctcctcctcag
gccgctcctgcgcagcaggctaagccggctaagttgccctctaagcctcttcccccggct
caggctgtgagggaaacaaagaatgaagttgggcgcggaggcggccgtggcagtggacgt
ggttatggacgtggacgtggtggagctggattgaacagagactcattcaataacgaaagt
acgcttaacaacaatgatggattctctggagggtacagaccatctgaagagggcgataca
ggcaaatcctttgaaaggcgtggttctggtggacctcgttctccttaccgtggtggtggt
cgtcgtggtggttttagcaatggagaggttggggagggggaacgtccccgtagggcatat
gaacgccgaagtggaactgggcgtggaaatgagattaagcgtgatggagctggtcgaggg
aactggggaactcctgctgatgagattgctccggagaatgaagaacctatcaatgaaact
gagaagaatacaagtgctgagaagcagttgggagaggaaattgctgcagatgccaacaag
gagaaccctgtcaatgaatcagaggagaaggagcctgaggataaggagatgactcttgaa
gagtatcagaaagtacttgaggagaagaggaaggctctacttgcactgaagactgaggag
aggaaggttgacgtcaaagactttgaagccatgcaacagctttcaagcaagaaggataat
gatgatgtcttcattaagctgggttctgaaaaggataaacgtaaagagcttgctgacaaa
gaagagagagccaaaaagtctgtcagcataaatgagttcctgaagccagctgaaggggag
aggtactatggtggtcgtggtaggggtcgtggccgtggtacaagaggaggatttgcaggc
aacacctacagcaatgtggctgctccatccattgaagatcctgggcagttccctacattg
ggtggcaagtga
DBGET
integrated database retrieval system
