Vitis vinifera (wine grape): 100265659
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Entry
100265659 CDS
T01084
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vvi04131
]
100265659
04121 Ubiquitin system [BR:
vvi04121
]
100265659
Enzymes [BR:
vvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100265659
Membrane trafficking [BR:
vvi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100265659
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100265659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING-like
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
100265659
NCBI-ProteinID:
XP_002283212
LinkDB
All DBs
Position
6:complement(6046456..6047622)
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AA seq
388 aa
AA seq
DB search
MEMASTTSYWCHRCTRFVRVWAQDSIVCPYCESGFLEEIEATPRSENHHRRFPATAMYML
GNNRPDSEQSANLGLRRSRRNAGDRSPFNPVIVLRGPADGGGGEGGVVERSSFELYYDDG
AGSGLRPLPATMSEFLMGSGFDRLLEQLSQIEINGFGRGEHPPASKAAVESMPTIEIVSS
HIVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPTDVPGTR
NSPVSGNEALSPAPNEEETVGLTIWRLPGGGFAVGRFSGGRRAGERELPVVYTEMDGGFN
NSGAPRRISWASRRSRSRESGGSLGRAFRNIFSFLGRFRSSSSSSSRSTSEPGSITRSHS
HSSSVFSRYVRRRSRAWVLEDQSGNSRW
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggagatggcttcgacgacgtcttattggtgtcacagatgcactcgtttcgttagagtt
tgggctcaagatagcatcgtgtgtccgtactgcgagagtggcttcttggaggagattgag
gccacgccgagatcggagaatcaccaccgtcggtttccggcgactgcgatgtacatgctg
gggaacaaccggccggattcggagcaaagtgcgaatctagggttgcggcggagcaggagg
aacgccggtgatcggtctccgtttaatccagttattgtgctccgcggtccggctgatgga
ggtggtggtgaaggtggtgttgtggagaggagtagttttgaattgtactacgatgacggg
gcagggtccgggcttcggccgttgccggcgaccatgtcggagttcttgatggggtcgggg
tttgatcggttgctggaacagctttcgcagattgaaatcaatggttttgggcgcggcgag
caccctccggcgtcaaaggcggccgtggagtcgatgccgacgatcgagatcgtgtctagc
cacatcgtcacagagttgcactgtgcggtatgcaaagaggcgttccagctgggttcggag
gctcgcgaaatgccctgtaagcatatctatcattccgattgtattctcccatggctatct
ctccgcaattcatgccctgtttgccgccacgagttgccgacggacgttcccggaacaagg
aactcgccggtatctggaaatgaagcactttctccggcaccaaacgaagaagagacagtg
gggctgaccatatggaggcttcctggcggtgggtttgccgtggggaggttttccggagga
agaagagccggcgagcgtgagcttcctgtggtgtacacagaaatggatggtgggttcaat
aatagtggtgctccaaggaggatttcatgggcatccagacgaagccgatccagagagagc
ggcggatcactgggcagagcttttcgcaacattttctcatttttagggaggtttaggtct
tcttcctcatcatcttctcgttcaacttcagaacctgggtccattaccagaagtcacagt
cactcaagttcggttttcagtagatacgttcggaggaggagcagagcttgggtactggaa
gatcaaagtggaaattcaagatggtga
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