Vitis vinifera (wine grape): 100265798
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Entry
100265798 CDS
T01084
Name
(RefSeq) squalene synthase 2
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00100
Steroid biosynthesis
vvi00909
Sesquiterpenoid and triterpenoid biosynthesis
vvi01100
Metabolic pathways
vvi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
100265798
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
100265798
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
vvi01006
]
100265798
Enzymes [BR:
vvi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
100265798
Prenyltransferases [BR:
vvi01006
]
Terpene biosynthesis
Squalene/phytoene synthase
100265798
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
100265798
NCBI-ProteinID:
XP_002266150
UniProt:
D7U5I9
A0ABY9BL28
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All DBs
Position
3:join(423213..423407,424748..424790,427218..427307,428306..428381,430493..430562,431551..431694,431776..431880,432087..432233,433410..433485,434439..434527,434957..435048,435126..435171,435257..435325)
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AA seq
413 aa
AA seq
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MGSLGAILTHPDDIYPLLKLKMAVRHAEKQIPPEPHWAFCYTLLHKVSRSFGLVIQQLGT
ELRNAICIFYLVLRALDTVEDDTSIRTDVKVPILIAFHRHIYDRDWHFACGTKDYKVLMD
QFHHVSTAFLELERGYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL
SKLFHASKLEDLASDELSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKL
EDLKEEENSIKAVQCLNDMVTNALIHMEDCLTYMSALQSPAIFRFCAIPQIMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIDRTKAMSDVYGAFFDFSCMLKSKVDKNDPNATKALSRL
EAVQKICRESGALTKRKSYVIRSEPRYNSALIVAFFIILSIIFAYLSANRQNN
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtttgggagcgattttgacgcatccggatgacatatacccactgctgaagctg
aaaatggcggtacgccacgccgagaagcagatcccgccggagccgcactgggccttctgc
tacactctgctccacaaggtctctcgcagcttcggtctcgtcattcaacagctcggcacc
gagctccgcaacgccatatgcattttctatttggttcttcgagcactcgacactgttgag
gatgatacaagcattcgtacagatgtcaaagtgcctattctgatagcttttcatcgtcat
atatatgaccgtgactggcattttgcatgtggtacaaaggactacaaggttctcatggac
caattccatcatgtttcaactgcttttctggagcttgaaagaggttatcaggaggcaatt
gaagacatcaccaaacgaatgggggcaggaatggcaaaatttatttgcaaagaggtggaa
accattgatgactatgatgaatattgccactatgtagcaggacttgttggattaggattg
tccaagcttttccatgcctccaagttggaagatttggcttctgatgaactctccaactca
atgggtttatttcttcagaaaacaaatataatccgagattatctggaggatataaatgag
atcccaaagtcacgcatgttttggccccgtgagatttggagtaaatatgttaacaaactt
gaggacttgaaagaggaggaaaactcaatcaaagcagtgcaatgcttgaatgacatggtc
actaatgctttaatacatatggaagattgcctgacatacatgtctgctttgcagagtcca
gcaatatttcgattttgtgctatcccacagatcatggcaatcgggacactagctttatgc
tacaacaatattgaggtcttcagaggagtagtaaaaatgaggcgtggtcttactgccaaa
gttattgacagaacaaaagcgatgtctgatgtctatggtgctttcttcgatttttcttgt
atgctgaagtccaaggttgacaagaatgacccgaatgctacaaaagcattgagcaggcta
gaagcagtacagaaaatttgcagggaatctggagcccttaccaaaaggaaatcctatgta
atcaggagcgaaccaagatataattcagctctgattgtggcattcttcatcatactgtcc
atcattttcgcgtatctatctgccaaccgtcagaataattaa
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