Vitis vinifera (wine grape): 100265941
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Entry
100265941 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100265941 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100265941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100265941
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100265941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
100265941
NCBI-ProteinID:
XP_002278722
LinkDB
All DBs
Position
19:join(7013168..7013347,7026769..7026840,7027371..7027460,7033362..7033404,7035899..7036005,7044277..7044372,7051243..7051433,7051532..7051601,7052329..7052439)
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AA seq
319 aa
AA seq
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MANLPQSLSMNAPFGGPPSSAANPAGAQVNKERKLASAENLVLELSNPELRENALLELSK
KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHS
ETRMLFLNAHIPLYLYPFLNTNSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
PLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQQ
STRLLKHIIRCYLRLSDNPRACDALRNCLPDMLKDATFSSCLREDPTTRRWLQQLLHNVG
GSRVAAFQAGGGFDHMLVN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacctgcctcaatcgctatccatgaatgcccccttcggaggtccgccctcttcg
gcggccaaccccgccggagctcaggtcaacaaggaacggaagttggcgtccgccgagaat
ttggtgctcgaactcagcaatcctgaacttcgtgaaaacgctcttcttgaactctctaag
aagagagaattatttcaagatttggctccattattgtggaattcttttggtactattgct
gcactattgcaggagatagtttcaatttatcctgttctatcaccaccaaatctaactcca
gcacaatcaaatcgggtctgcaatgcacttgcccttctccagtgtgtagcttctcattca
gaaacaaggatgctgttcctaaatgcccacatacccttgtacctgtaccctttcctcaat
accaatagcaaatctaggccttttgagtacttgagactaactagcctaggtgttattggt
gctttggtgaaggttgatgatacagaagttattagtttccttctctcaacagaaataatt
ccgctgtgcctacgcaccatggagatggggagtgaattgtcaaaaacagttgccacattt
attgttcaaaaaattctgttggatgatgtgggcttggattatatttgtactacggcagag
cgattttttgcagtaggtcgagttttggggaatatggtcgcagcacttgctgagcaacaa
tcaacaaggcttcttaagcatattattcgatgttatcttcgattatcagacaacccaagg
gcttgtgatgcattaagaaattgccttccggacatgttaaaagacgccactttcagtagt
tgtcttcgtgaagatccaacaacgaggaggtggttgcagcagctgcttcacaatgttggg
ggaagccgggttgctgcatttcaggcggggggaggatttgaccatatgctggtgaactga
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