Vitis vinifera (wine grape): 100266053
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Entry
100266053 CDS
T01084
Name
(RefSeq) serrate RNA effector molecule isoform X1
KO
K27103
serrate RNA effector molecule
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100266053
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
100266053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
100266053
NCBI-ProteinID:
XP_010659013
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All DBs
Position
13:join(17047275..17047717,17059968..17060086,17061046..17061103,17064339..17064413,17064513..17064587,17064676..17064723,17064963..17065031,17065241..17066044,17066124..17066172,17066615..17066901,17067006..17067185,17072580..17072640)
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AA seq
755 aa
AA seq
DB search
MAQVMNMPLDSLEKPDKSPSATADAVADDDSAPPPPPPPPPSQPQQTLPVRRRDRDSRER
MDDRDGDRPRNRRGSGADHYDRNLSPPPRDRERDFKRRRSPSPPYRDRRHSPPRRSSPPL
HFKRSRRDDGGYDRRGSPRGGFGPDDRRFGYDYIGGYERMGGRPGYPDEKSHGRFMNRSG
GYQNMPFDWESNRGGYADLLDTGSKQREGLMSYKQFIQELEDDILPAEAERRYQEYRSEY
ISTQKRAFFDAHKDEEWLKDKYHPTNLLAVIERRNENARRMAKDFLLDLQSGTLDIGPGV
NASSSNKSGQTSDPNSDDETETGDKRRRHGRGPIKESDLSTAAVAHPNSSEPRRIQADIE
QALALVRKLDSEKGVEDNILCSAEQKKTDSDKSHSGSMGPIIIIRGLASVKGLEGIELLD
TILTYLWRIHGLDYYGMVETSEAKGLRHVRAEGKGHEENSKAGADWEKKLDSRWQDRLRG
QDPLETMAAKEKIDAAAVEGLDPYVRKIRDERYGWKYGCGAKGCTKLFHAAEFVHKHLKL
KHPELVMDLTTKVREDLYFQNYMNDPDAPGGTPVMQQQLLKDRLQRRRPGLDNRLKDDRG
NRREHDRIERINDGERFDRTDNSPPHDRQSKGGGLEGGNLDESMYDTYGGKDLGVIPPFP
SDMGPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGSSSYEGGRQMRTGPHIGGPAPI
LGVSSAFRQDPRRLRSYQDLDAPEDEVTVIDYRSL
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggtcatgaacatgcccctcgactccctcgaaaagcccgacaaatccccctcc
gccaccgctgacgccgtcgctgacgatgactctgcgccaccaccgccaccacctccgcct
ccgtcgcagccccaacagactttgcccgttaggcggagggacagagattccagggagagg
atggacgatagggacggcgatcgccctcgtaatcgccgcggcagcggcgccgatcactac
gaccggaacctgtctcctccgccacgggaccgagagagggacttcaagcgccgccgtagc
cccagccctccttaccgcgaccgccgccactcaccgccgcgccgctcctctccgccattg
catttcaagcgctctcggagagatgatggcggctatgataggcggggaagtccccgtggt
gggtttggcccagatgacagaaggtttggctatgattatattggtggttatgaacggatg
ggaggccggcctggatatcctgatgaaaaatctcatggtcggtttatgaatcgttcaggt
ggctatcaaaacatgccttttgattgggaatctaatcgtggtggttatgctgacttgtta
gacacaggaagtaaacaaagagaaggtttgatgtcctataagcaattcattcaggagctt
gaagatgatatattaccagctgaagctgagcgcaggtatcaagaatatagatcagaatac
atttctactcagaagcgtgccttctttgatgctcataaggatgaggagtggttgaaagac
aagtaccatccaacaaatttacttgcagtcattgaaaggaggaatgaaaatgctcgacgg
atggcaaaggattttttacttgatttgcagagtggaaccttggacataggccctggtgta
aatgcctcgtcatcaaacaaatcagggcaaaccagtgatccaaactctgatgatgaaact
gagactggtgacaaacgaagacgacatggtaggggaccgatcaaagaaagtgatctttcg
actgctgcagtggctcatccaaacagttctgagcctagacgaatacaagctgatatagaa
caagcactggctcttgtgcgcaagcttgattctgaaaaaggggttgaagataatatttta
tgcagtgctgaacaaaaaaagacggacagtgataaatctcacagtggatccatgggccct
attataatcatacgaggtttagcgtctgtcaagggccttgaaggaattgagctattggac
acaattcttacttatctttggcgtatccatggtttggattactatggcatggttgaaaca
agtgaagccaagggtcttcggcatgtgagagcagagggaaagggtcatgaagaaaatagt
aaagctggggctgactgggaaaagaaattagactctcgttggcaagacaggttgaggggt
caggatcccttggaaacaatggctgctaaagagaagatagatgcagcagctgttgaaggt
ttagatccatatgtacgaaaaataagagatgagaggtatggatggaagtatggttgtgga
gccaagggttgcacaaagctcttccatgcagctgaatttgtgcataagcatctgaagttg
aaacaccctgaactcgtcatggatctgactacgaaagtgcgtgaggatctgtatttccaa
aactatatgaatgatccagatgctcctggtgggacacctgtcatgcagcagcagctgctg
aaagacaggctacagaggcgtaggcctggtctggataatcgattgaaagatgatcgtggt
aacaggagggaacatgacaggattgaaagaattaacgacggtgaacggtttgataggact
gataactctccaccccatgatcgacagtccaaaggtggtggcttggaaggaggaaatctt
gatgaatccatgtatgatacttatggtgggaaagacttgggtgtcattccgccttttccc
tcagatatgggtcctcctccagtcttgatgcctgtacctggtgctgggcctttgggacct
tttgttcctgcaccacctgaggttgcaatgcgtatgttaagggagcagggaggctcatcc
tcatatgaaggtggtagacaaatgcgtactggtccccatattgggggaccggcaccgatc
cttggtgtatcatctgcttttagacaagatcctcgacgattacgaagttatcaagatctg
gatgccccagaggatgaagtgaccgtgatagactacaggagcttgtag
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