Vitis vinifera (wine grape): 100266198
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Entry
100266198 CDS
T01084
Name
(RefSeq) actin-interacting protein 1-2
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
vvi04990
]
100266198
Domain-containing proteins not elsewhere classified [BR:
vvi04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
100266198
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
NBCH_WD40
Beta-prop_Vps41
Beta-prop_SPT8
eIF2A
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
Beta-prop_ELP1_1st
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
100266198
NCBI-ProteinID:
XP_002281466
UniProt:
D7SJ83
LinkDB
All DBs
Position
17:join(2915908..2916299,2919270..2919431,2921289..2921475,2923228..2923650,2927639..2928046,2929377..2929634)
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AA seq
609 aa
AA seq
DB search
MPELSETYACVPSTERGRGILISGDPKSNAILYTNGRSVIIRYLHKPLEVSIYGEHAYQA
TVARFSPNGEWIASADVSGTVRIWGTHNDHVLKKEFRVLSGRIDDLQWSADGMRIVVSGD
GKGKSFVRAFMWDSGSNVGEFDGHSKRVLSCAFKPTRPFRIVTCGEDFLVNFYEGPPFKF
KQSHRHHSNFVNCIRYSPDGSKFISVSSDKKGVIYDGKTGEKIGELSSEDGHKGSIYAVS
WSPDSKQVLTVSADKSAKVWEISEDGNGKVKKTLTCPGSGGVEDMLVGCLWQNDHLVTIS
LGGTVSIFSASDLDKGPLSFSGHMKNVNSLAVLKSNPKVMLSTSYDGLIIKWIQGIGYSG
RLDRKENSQIKCFAAVEEEIVSSGFDNKIWRVSLQGDQCGDADCVDIGSQPKDLSLSLLS
PELALVSTDSGVVILRGTNVVSTINLGFPVAASVISPDGSEAIIGGQDGKLHIYSVTGDT
LKEEAVLEKHRGAITVIRYSPDVSMFASGDANREAVVWDRASREVRVKNMLYHTARINCL
AWSPDNSMVATGSLDTCVIIYEIDKPASSRVTIKGAHLGGVYGLAFTDDTSVVSSGEDAC
VRVWKLTPQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctctctgaaacctacgcctgcgtgccgtccacggagcgcggccgaggcatt
ctcatctccggcgatcccaaatccaatgccattctctataccaacggtagatccgtcatc
atccgctacctccataagcctctcgaggtctccatctatggagagcacgcgtatcaggct
accgtggcgcgtttctcccccaacggcgagtggatcgcatcagcggacgtctcaggaacg
gttaggatttgggggacgcacaatgatcatgtgctgaagaaggagtttagggttttgtct
ggtcggatcgatgatcttcaatggtcagcggatgggatgaggatcgtggtgtctggtgac
ggcaagggcaagtcgtttgttcgcgcttttatgtgggactcaggcagtaatgtgggggag
tttgatggccattcaaagcgagttcttagctgtgcatttaagccaaccagaccatttcgc
atagtcacatgtggagaggactttctagtgaacttctacgaaggaccaccttttaaattc
aagcaatcccacaggcatcattcaaattttgtcaactgtataaggtattctccagatggg
agcaagttcatcagtgtaagttctgataagaagggtgtgatttatgatggaaaaaccgga
gagaagattggagagctatcctctgaagatggtcataaaggcagcatctatgctgtcagc
tggagtcctgatagtaaacaagtgttgactgtgtctgctgacaagtctgcaaaagtatgg
gagatctctgaggatggtaatggaaaggtgaagaaaactttaacttgtcccggctcagga
ggagtggaagacatgttagtggggtgtctttggcaaaatgatcatcttgtcacgatttct
cttggtggcacagtcagtatattctcagcaagtgatctggataaaggcccattatcgttc
tctggacacatgaagaatgttaattcactagcagtactcaaaagcaatcccaaagttatg
ttgtccaccagctatgatggtttaataattaaatggattcaaggaattggatatagcgga
agattggataggaaagagaattctcaaatcaagtgttttgcagcagttgaagaagagatt
gtttcatctggatttgacaacaagatttggagagtttctctacaaggggatcaatgtggg
gatgcagattgcgttgatattggcagtcaaccaaaggacttgagcctttcccttctttct
cctgaactggcactggtttcaactgattcaggagttgttattctccgtggtacaaatgta
gtatcgaccattaaccttgggtttcctgtggccgcatctgtaatctcacctgatggaagt
gaagctataataggtgggcaggatggcaaattacacatatattctgtcacaggtgatact
ttaaaagaagaggcagtacttgagaaacatcgtggtgcaattactgttatacgttattcc
ccagatgtttctatgtttgcatcaggagatgccaatcgagaagctgttgtctgggaccgt
gcttccagagaggtgagggttaagaacatgttgtaccatactgcccgcataaattgcctg
gcctggtctcctgataacagcatggtagctactgggtcactcgacacatgtgtcatcata
tatgagattgacaagccagcatccagccgtgtcaccataaagggagcccacttgggtggg
gtttatggtttagcatttactgatgataccagtgtggtgagttctggcgaagatgcttgt
gttcgagtttggaagttaaccccacaatag
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