KEGG   Vitis vinifera (wine grape): 100266203
Entry
100266203         CDS       T01084                                 
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
  KO
K03456  serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03015  mRNA surveillance pathway
vvi04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100266203
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    100266203
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:vvi01009]
    100266203
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100266203
   03036 Chromosome and associated proteins [BR:vvi03036]
    100266203
Protein phosphatases and associated proteins [BR:vvi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     100266203
Messenger RNA biogenesis [BR:vvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     100266203
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     100266203
SSDB
Motif
Pfam: HEAT PPP2R1A-like_HEAT HEAT_2 HEAT_EF3_N Vac14_Fab1_bd Htt_N-HEAT_1 HEAT_EZ PDS5 Adaptin_N CLASP_N Cnd1 TPR_TNPO3_IPO13_3rd
Other DBs
NCBI-GeneID: 100266203
NCBI-ProteinID: XP_002276180
LinkDB
Position
17:join(4199071..4199463,4200594..4200840,4202105..4202217,4209193..4209272,4209569..4209710,4209851..4209931,4212452..4212556,4212829..4213011,4213906..4213998,4214440..4214579,4214695..4214761,4215232..4215351)
AA seq 587 aa
MAMIDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHANVLLPPLETLCTVEETCVRDKAVESLCRIGAQMREP
DLVESFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPETLKTELRAIYSQLCQDDMPMVR
RSAASNLGKFAATVEAAHLKADIMSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRSDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIDQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPDWAMQHIIPQV
LDMINNPHYLYRMTILHAISLLAPVMGPEITCSKLLPVVINAAKDRVPNIKFNVAKVLQS
LTPIVDQSVVDKTIRPCLVELSEDPDVDVRFFASQALQASDQIMMSS
NT seq 1764 nt   +upstreamnt  +downstreamnt
atggctatgattgacgagcctctgtatccaattgcggttttgatcgatgagctcaagaac
gaggacattcagcttcgattgaactcgatccggcggctctcgacgattgctagggcgcta
ggagaggagaggactaggaaggagttgattccatttctgagcgagaataatgatgacgat
gatgaggtgcttcttgcgatggctgaagaattgggggtatttattccctatgtcggaggt
gttgagcacgcgaatgttctgcttcctccattggagaccctctgcactgttgaggaaact
tgtgtgagggacaaagcggtggagtcgttatgcaggattggagctcaaatgagggagcca
gatttggtggaatccttcattcctttggtgaagagattggctgctggcgagtggtttact
gctcgagtttcctcatgtggattatttcatattgcttaccccagcgctccagagacatta
aaaactgaattacgagcaatatatagccagctgtgtcaagatgacatgccaatggtgagg
agatctgctgcatcaaatctgggaaagtttgctgctactgttgaagctgctcatttgaag
gctgacatcatgtcaatatttgaggatctgacacaggatgatcaagattctgttaggtta
ttggctgttgagggttgtgcagctctcggaaagctgttggaacctcaagattgtgtagca
catattcttcccgtaattgtgaatttctctcaggataagtcttggcgtgttcgctatatg
gttgcaaatcaattatatgagctatgtgaagctgttggtcctgagcctaccaggtcagac
ttggttcctgcatatgttcggttgcttcgtgacaatgaggctgaagtacgcatagcagct
gcaggaaaagtaacaaaattttgccggattttgaacccagaacttgcaattcagcatatt
cttccttgtgtgaaggaattatcatcagattcttcccagcatgttcgttctgctttggct
tcagttattatgggaatggcacctgttttaggaaaggacgcaacaatagatcaacttctg
cccattttcctttctctgcttaaagatgagtttcctgatgtccgactgaatattatcagc
aagcttgatcaagtaaaccaggtgattggaattgatctgctgtctcaatccttactgccg
gccattgttgagcttgctgaggatagacactggagggttcggcttgcaataatagaatac
attcctttactagcaagtcagctgggtgttggtttttttgatgacaagcttggtgctctt
tgcatgcaatggttaaaagataaggtttattcaattcgtgatgcagctgctaataatgtg
aagcgccttgcagaggaatttggcccagattgggcaatgcagcacataattccacaggtt
ttggatatgattaacaacccacactatctgtatcggatgaccatcctccatgcaatttct
ctccttgcccctgttatgggcccagaaattacatgctcgaaacttctgccagtggtcatt
aatgcagcaaaagacagggtacccaacataaagttcaatgtggctaaggtgttgcagtca
cttactcctatagtggaccagtctgtggtagacaagacgattcgtccctgtttggttgag
ctgagtgaggacccagatgttgatgttaggttttttgcaagccaagcactacaggcaagt
gatcagatcatgatgtctagctag

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