KEGG   Vitis vinifera (wine grape): 100266260
Entry
100266260         CDS       T01084                                 
Name
(RefSeq) UBP1-associated protein 2B isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100266260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100266260
   03041 Spliceosome [BR:vvi03041]
    100266260
Messenger RNA biogenesis [BR:vvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     100266260
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100266260
Spliceosome [BR:vvi03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    100266260
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 HCV_NS4b
Other DBs
NCBI-GeneID: 100266260
NCBI-ProteinID: XP_002276585
UniProt: A0ABY9CAS9
LinkDB
Position
7:join(28029657..28030846,28035315)
AA seq 396 aa
MAKTKKSKKQKLTKKTPKKIEKKLKSKKVEKALATKPSDSDSDSDSGFDKLQKLLEPYSK
DQLIGFISDAAASDSSLFQRIRETADRDVSHRKIFVHGLGWDTTRETLLAAFEPYGQIED
CNVVTDRNTGKAKGYGFVLFKTRQGAVKALKQPGKKINNRMTQSQLASMGPSPPPQSQDT
VGRKIYVSNVQADVDPERLRSFFAKFGEIETGPIGFDTQTGKSRGFALFVYKNQESARKA
LEDPYRIFEGHQLHCQKATEGKNKVPAQPQPQLAAVAATQNFMLSQHPTLNTLYSGLLAH
PNASMIGAAAVNPAVAGAMNPGVISSSQVGSVIGSVEGLGGYGTHGVAGFGGTPSVLGPP
SLGLQHAYPSTQLGQSSVGRVQGTGVGTFGGYPSYM
NT seq 1191 nt   +upstreamnt  +downstreamnt
atggccaagaccaagaaatcgaagaagcaaaagctcactaaaaagactcctaagaagatc
gagaaaaagcttaaatccaagaaggtggaaaaagccctagccaccaaaccttccgattcc
gactccgattcagactccggcttcgacaagctccagaaacttctcgaaccttactctaag
gatcaactcataggctttatttccgatgccgccgcctccgattcctctctcttccagcgc
atccgcgaaaccgccgatcgcgacgtctctcaccggaaaatcttcgtccacggcctcggt
tgggacactactcgcgaaaccttgctggcggcgtttgaaccctatggccaaattgaggac
tgcaatgtcgtcacggatcggaatactggaaaggccaagggctatggattcgttctcttc
aagacgcgccaaggtgctgtcaaggcgctgaagcagccggggaagaagattaataaccgt
atgacgcagagccagctcgcgtcgatgggtccgtcgcctccgccgcagagccaggacacc
gtcggccggaagatctacgtgagtaatgttcaggccgatgtggatcctgagagattgcgg
tcgttctttgcgaagttcggggagatcgagaccggaccaatcgggttcgatacgcagact
gggaagtcgagggggtttgcgctttttgtgtataagaatcaggaaagcgcaaggaaggct
ctagaagatccgtacaggatatttgaggggcatcaattgcattgccagaaggcaacggag
gggaagaacaaggtcccggcacaaccgcaaccacagctggcagcggttgctgcgacgcag
aatttcatgttaagccagcatccaactctcaatacgttgtacagtgggttgctcgcccat
ccgaatgcaagtatgattggggcggcagcggttaatccggcggtagcaggagctatgaac
ccgggcgtgatttcgtcgagccaagttggttcggtcattggtagtgtggaaggtttagga
gggtatgggacgcatggggtggctggttttggggggactccttcagtgctcggccctcca
agtctcggtctgcagcatgcctacccaagtacacagctcgggcaatcttcggtgggtagg
gttcaagggactggtgttgggactttcggtggttacccgtcgtatatgtga

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