KEGG   Vitis vinifera (wine grape): 100266280
Entry
100266280         CDS       T01084                                 
Name
(RefSeq) glycine dehydrogenase (decarboxylating), mitochondrial
  KO
K00281  glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi00260  Glycine, serine and threonine metabolism
vvi00630  Glyoxylate and dicarboxylate metabolism
vvi00670  One carbon pool by folate
vvi00785  Lipoic acid metabolism
vvi01100  Metabolic pathways
vvi01110  Biosynthesis of secondary metabolites
vvi01200  Carbon metabolism
Module
vvi_M00532  Photorespiration
vvi_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    100266280
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    100266280
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    100266280
   00670 One carbon pool by folate
    100266280
Enzymes [BR:vvi01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.4  With a disulfide as acceptor
    1.4.4.2  glycine dehydrogenase (aminomethyl-transferring)
     100266280
SSDB
Motif
Pfam: GDC-P GcvP2_C Aminotran_5 Beta_elim_lyase Cys_Met_Meta_PP
Other DBs
NCBI-GeneID: 100266280
NCBI-ProteinID: XP_002282271
LinkDB
Position
11:join(1855146..1856378,1856599..1856844,1856929..1857006,1857103..1857203,1857282..1857477,1857576..1857701,1857867..1858052,1858184..1858297,1858661..1858813,1859648..1859836,1860119..1860196,1860275..1860400,1860482..1860580,1860681..1860798,1860930..1861027)
AA seq 1046 aa
MERARRLANRAILRRVVAESKRHLHISSSSPALVDSSSSFRSVSSMSLLRSHLILGSNVR
NATGSGVGSQLRSISVESLRPSDTFPRRHNSATPQEESSMAETCGFSSLDALIDATVPKS
IRIGSMKFSKLDEGLTESQMIEHMNQLAAKNKVYKSFIGMGYYGTLVPHVILRNIMENPG
WYTQYTPYQAEISQGRLESLLNYQTMVSDLTGLPMSNASLLDEGTAAAEAMAMCNNIQKG
MKKTFLIANNCHPQTIDVCKTRADGFGLKVVTLDLKDFDYKSGDVCGVLVQYPGTEGEVL
DYGEFIKKAHANGVKVVMASDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFL
ATSQEYKRMMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMSAM
YAVYHGPEGLKTIAQRVHGLAATFAYGLKKLGTVDPQGIPFFDTVKIKCSDSRAIADAAY
KKEMNLRILDSNTITVSFDETTTLEDVDKLFKVFSCGKPVTFTAASLAPEVDTMIPPGLV
RESSYLTHPIFNSYHTEHELLRYIHRLQAKDLSLCHSMIPLGSCTMKLNATTEMMPVTWP
SFANIHPFAPIDQAQGYQEMFNDLGELLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHL
ARGDHHRNVCIIPVSAHGTNPASAAMCGMKIVAVGTDAKGNINIKELRKAAEANRDNLSA
LMVTYPSTHGVYEEGIDEICKIIHENGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHK
TFCIPHGGGGPGMGPIGVKKHLAPFLPAHPVVPTGGIPSSENAQPLGTISAAPWGSALIL
PISYTYIAMMGSKGLTEASKIAILKANYMAKRLEDHYPILFRGINGTVAHEFIIDLRGFK
NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIA
QIEKGKADPNNNVLKGAPHPQSLLMQDAWTKPYSREYAAFPASWLRAAKFWPSTGRVDNV
YGDRNLTCTLLSPSQAAEEQKAAATA
NT seq 3141 nt   +upstreamnt  +downstreamnt
atggaacgagctcggcggctcgcgaacagggcgatcctcaggcgggtcgtggccgagtcg
aagcggcatctccacatctcatcttcttcccctgcattggtagactcttcttcgagtttc
aggtctgtctcttctatgtctctgttgagatcccatttgatattgggatcgaatgtgaga
aatgcaactgggtctggtgtcgggtcgcagctcagatcgatatcggttgagtcgctgagg
cccagtgacaccttccctcgtcgtcataactctgcaaccccacaggaagaatccagtatg
gctgaaacttgtgggttttcgagtcttgatgctcttattgatgccactgtccccaaatcg
atccggattgggtcaatgaaattttcgaagttggatgaggggctcacggagagccagatg
attgagcacatgaaccaattggcagcaaagaataaggtctacaagtcttttatagggatg
ggttattatggaactcttgtgcctcatgtgatcttgaggaacattatggaaaacccgggt
tggtatactcagtacacgccttatcaagctgagatatcgcaagggaggcttgagtctttg
ctcaattatcagaccatggtttcagatcttactgggttacccatgtctaatgcttcttta
cttgatgaggggacagcggcagctgaggcaatggccatgtgtaataacatccagaaaggg
atgaagaagacatttcttattgccaacaactgccatcctcagacaattgatgtttgcaag
actagagctgatgggtttggtcttaaagtagttactttggatcttaaagattttgattat
aaatctggtgatgtttgtggggttctggttcagtatccaggtactgagggtgaggttttg
gattatggggaattcataaagaaggcacatgctaatggggttaaggttgtgatggcatcg
gatcttttagcattgacaattttaaagcctccaggtgaattgggggcagatattgttgta
ggctcagctcagaggtttggtgttccaatggggtatgggggccctcatgcagcattcttg
gctacttcccaagagtacaaaaggatgatgccaggaagaattattggcgtcagcgttgat
tcgagtggaaagcctgctctgcgaatggcaatgcagacaagggagcaacatatccgaagg
gacaaagccaccagcaatatctgcactgctcaggcattgcttgcaaacatgtctgctatg
tatgcggtttatcatggaccagaaggccttaagacaattgcacaaagggtccatggtcta
gcagcaacttttgcttatggtttgaagaagcttggcacagtggatcctcagggaattccc
ttctttgacactgtgaagatcaagtgttctgattcaagggcgattgctgatgctgcttac
aagaaggaaatgaatttgcggattttggactcaaatactataactgtttcttttgatgag
acaacaacattagaggatgtggacaagcttttcaaagtgttctcttgtggcaagccagtg
accttcaccgctgcatctcttgcaccagaggttgataccatgatcccacctgggcttgta
agagaaagttcatatttgactcatccaatcttcaactcgtaccacacggagcatgagcta
ctcagatacattcatagattgcaagcgaaggatctctctttatgccacagtatgattcct
ctgggatcttgtactatgaaattgaatgcaacaactgagatgatgccagtgacttggcct
agctttgctaacatccacccttttgctcctattgaccaagcccaggggtatcaggagatg
ttcaatgatttgggtgaactattgtgtaccatcactggattcgactcgttctctctgcaa
cctaatgctggtgctgcaggggagtatgctgggctaatggttatccgtgcttaccatctg
gctagaggagatcatcaccgcaacgtgtgcattatacctgtctctgcacacgggaccaac
cctgccagtgcagcaatgtgtggaatgaaaattgttgctgttggaactgatgccaaaggc
aacatcaacatcaaggagttaagaaaggcagctgaagcaaatagggacaatctatctgct
cttatggtcacttatccttcgacccacggtgtctacgaggaaggtattgatgagatatgc
aagataattcatgagaatgggggtcaagtttacatggatggagctaacatgaatgcacag
gttggtttgacaagcccaggttggattggagcagatgtctgccatcttaatcttcataag
acattttgcattccccatggtggaggtggtccaggcatgggtcccattggtgtgaagaaa
cacttggcaccatttctaccagcacatcctgtggttcccacagggggcataccatcatca
gaaaatgctcagccactgggtactatctctgctgcaccttggggctctgcacttattttg
ccgatttcatacacctacattgccatgatggggtctaagggactcactgaagcctcaaag
attgcgatcctgaaagcaaactacatggccaaacgcttggaggaccattacccaatcctt
ttccgtggcatcaatggcacggttgcccatgaattcataattgatttaaggggcttcaag
aatactgctggaatagagcctgaagatgttgctaaacgtctcatggattatgggttccat
gggccaacaatgtcctggccagtaccaggaacactcatgattgaacccactgaaagtgaa
agcaaggcagagttagacagattttgtgatgccctgatatccatcagagaggaaattgct
cagattgagaaagggaaagctgatcctaacaacaatgttctcaagggtgctccacatcca
caatcactcctgatgcaggatgcatggacaaaaccatattcacgggaatatgcagccttt
ccagcttcctggctccgagcagccaagttctggccttcaactggacgtgtggacaatgtg
tatggtgaccgcaacctcacttgtacccttctttcaccatcccaggcagcggaagaacag
aaggcggcagctacagcatag

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