Vitis vinifera (wine grape): 100266445
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Entry
100266445 CDS
T01084
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100266445
Spliceosome [BR:
vvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100266445
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
100266445
NCBI-ProteinID:
XP_002283748
UniProt:
D7SXE2
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All DBs
Position
14:complement(join(29866011..29866376,29866600..29866712,29868166..29868247,29868336..29868440,29868507..29868564,29876164..29876259,29876368..29876441,29876524..29876586,29877493..29877702,29878053..29878235))
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AA seq
449 aa
AA seq
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MSTSGQPQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVE
FLDLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLL
PEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQPALGPDGKKKEP
ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGMQALIQYPDVTTAAVAKE
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAHSDRSRDYTIPDSGLLAVQQAPGHPGATTVW
QNPQAAPLYTGHDAAAAAAVQVPSWDPNMQAGRSTFASAASAFPSQPFASSSISAYPAPP
GSSPLTPAVPPNVRPGGASPPGRPPYFGQ
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtccacctcggggcagccgcagttccgatacactcagaccccgtcgaaggtcctccac
cttcgcaatcttccatgggagtgcaccgaggaggagcttgtggagctctgtaaacccttc
ggcaagatcgtcaacaccaagtgcaatgtcggcgccaatcgcaaccaggccttcgtggaa
ttcttggaccttaatcaggccatttctatggtttcatattatgcttcatcttcggaacct
gcacaggttcgtggtaagactgtgtatatccaatactctaacagacatgaaattgtcaat
aacaagagtccgggagatgttcctggaaatgtcttgctggtaacaatcgagggtgtagaa
gctggcgatgtgagcatagatgttattcacttggtgttctctgcttttggatttgtgcac
aaaattgctacatttgaaaaggctgcaggtttccaggccttaatccaattcaccgacgct
gagactgcttcttcagcaaggaatgcattggatggaagaagtattcccaggtatttactg
ccagaacatgttggttcatgtcacttgcgtatctcatattctgcacacacagatctgaat
atcaagttccagtctcatcgaagcagggactacacaaatccataccttcctgtgaatcct
actgcaattgagggaatagcacagcctgctttaggtcctgatggcaagaaaaaagaacct
gagagtaatgttcttcttgcttcaattgagaatatgcaatatgctgttacagtagatgtt
cttcacacggtattctctgcatttggtactgtccagaaaattgccatatttgagaagaat
ggtgggatgcaggctctaattcaatatcctgatgtcacaactgcagcagttgccaaagaa
gctctagagggacactgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggcacatagtgatagaagtagagattatacaatccca
gattcaggtctgcttgcagtgcaacaagcacctggtcacccaggtgctacaactgtatgg
cagaatcctcaggctgctccattgtatactgggcatgatgccgctgctgcagctgctgtg
caagtgccatcatgggacccaaacatgcaggcaggtagatcaacctttgcttcggctgct
agcgcatttcccagtcaaccatttgcatcatcttctatttctgcttatccggctccccct
ggttcatcacccttgacaccagctgttccgccaaatgtgcgacctggtggtgcttcacct
ccaggccgtcctccttactttggtcagtaa
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