Vitis vinifera (wine grape): 100266606
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Entry
100266606 CDS
T01084
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04142
Lysosome biogenesis
vvi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
100266606
04148 Efferocytosis
100266606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vvi04131
]
100266606
Membrane trafficking [BR:
vvi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100266606
Hops complex
100266606
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
VPS18_solenoid_2nd
Clathrin
TPR_Vps41
zf-C3H2C3
Beta-prop_WDR36-Utp21_1st
zf_RING_Vps8_fungal
zf-C3HC4_2
APC_rep
zf-RING_5
OCRL_clath_bd
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
100266606
NCBI-ProteinID:
XP_059597327
LinkDB
All DBs
Position
12:join(8946896..8947117,8947709..8947882,8948015..8948338,8948435..8950207,8959162..8959551)
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AA seq
960 aa
AA seq
DB search
MYQWRKFEFFEEKLAGKCSIPEEVAGKIECCSSGRGKIVLGCDDGTVSFLDRGLKFNYGF
QAHSSSVLFVQQLKQRNYLVTVGEDEQVSPQLSAMCLKVFDLDKMQPEGSSTMSPDCIQI
LRIFTNQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNVS
DKSNSSITGLGFRMDGQALQLFAVTPTSVSLFSLQSQPPRRQTLDQIGCNVNSVTMSDRL
ELIIGRPEAVYFYEVDGRGPCWAFEGEKKFLGWFRGYLLCVIADQRNGKNTFNIYDLKNR
LIAHSLVVKEVSHMLCEWGNIILIMADKTALCTGEKDMESKLDMLFKKNLYTVAINLVQS
QQADAAATAEVLRKYGDHLYGKQDYDEAMAQYIHTIGHLEPSYVIQKFLDAQRIYNLTNY
LEKLHEKGLASKDHTTLLLNCYTKLKDVEKLNVFIKSEDGEHKFDVETAIRVCRAANYHE
HAMYVAKKAGRHELYLKILLEDLGRYEEALQYISSLEPGQAGVTVKEYGKILIEHKPVAT
IEILMKLCTEEGDLAKRGTSNGTYLSMLPSPVDFLNIFIHHPQSLMDFLEKYTNKVKDSP
AQVEIHNTLLELYLSNDLNFPSISLSDTVGDLNLKTRRPSGEAMMSKVESNGKVRGDCND
LTKEKGRLERLEKGLQLLKSAWPSEMEHPLYDVDLAIILCEMNAFKEGLLYLYEKMKLYK
EVIACYMQAHDHEGLIACCKRLGDSGKGGDPSLWADLLKYFGELGEECSKEVKEVLTYIE
RDDILPPIIVLQTLSRNPCLTLSVIKDYIARKLEQESKLIEEDRRFIEKYQEETLAMRKE
IQDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHQRCLGDNEKECPECAPEYRSVLE
MKRNLEQNSKDQDQFFQQVKSSKDGFSVIAEYFGKGIISKTSNGPTGSLRSGSTASSSGF
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagtggaggaagttcgagttcttcgaggagaaactcgccggaaaatgctcaatc
cccgaggaagttgccggaaaaatcgagtgttgttcgagcggaagagggaagatagtcttg
ggctgcgacgacggcaccgtgagttttctcgatcgaggtttgaagttcaattatggattc
caagctcactcttcttctgttctcttcgttcaacagctcaagcaaagaaactacctagta
actgttggagaagatgaacaagtatctccacaactgtcagctatgtgtctgaaagttttt
gaccttgataagatgcagccagagggctccagcacgatgagtcctgattgtattcagata
ttgcggatattcactaatcagttccctgaagcgaagattacatcgtttttggtcctggag
gaagctcccccaatactacttatagctattggattagacaatggttgcatttattgcatc
aaaggggatattgcacgtgagcgaatcacacgtttcaagcttcaggtggataatgtttca
gacaaaagcaattcttcaatcacaggtttagggttccgtatggatggtcaagccctccaa
ctctttgcagttactccaacttcagtgagtttgtttagcctgcagagtcaaccacccagg
cggcaaaccctagatcagattggatgcaatgttaatagtgtaacaatgagtgatcgcttg
gagctaataattggtcggcctgaggctgtatatttctatgaagttgatggacgtggtcct
tgttgggcttttgaaggggagaagaaattccttgggtggtttcgtggatatcttttatgt
gttattgcagatcaaagaaatggcaagaatactttcaacatttatgacctgaagaaccgt
ttgattgcccacagtctagtggttaaagaagtttctcatatgctttgtgaatggggtaac
ataatacttataatggctgacaaaactgctttatgtactggagagaaagatatggaaagc
aagttagatatgcttttcaagaagaatctttatactgtggccatcaatcttgttcaaagc
cagcaagctgatgctgcagcaactgctgaagtactaaggaaatatggggatcatttatat
ggcaaacaagactatgacgaagctatggcccagtacatacataccattggtcaccttgaa
ccttcatatgtgatacaaaagttcttagatgcccaaagaatctacaaccttaccaattac
ttggaaaaactacatgagaagggacttgcttctaaagatcataccacacttctgctgaac
tgctacaccaaactgaaagatgttgaaaagttgaatgtgttcatcaaaagtgaggatggg
gagcataagtttgatgtggagactgcaataagggtctgccgtgctgccaactatcacgag
catgcaatgtatgttgctaagaaggcaggaaggcatgagttgtacttaaagatcttactt
gaggaccttggtagatatgaagaagctttgcaatatatttcaagtcttgaaccaggtcaa
gctggggtcacagtgaaagagtatggtaagattctcatagagcacaagccagtggcaaca
atcgaaatactcatgaagctttgcactgaggaaggagatctggccaagagaggcacttct
aatggtacatatttatccatgttgccatctcctgttgattttctcaacattttcattcac
catccacagtcgctaatggattttcttgaaaagtataccaataaggtgaaggactcgcct
gctcaagtagaaattcacaacacactcttggagttgtacctgtctaatgacttgaacttc
ccatctatttcactatctgacactgttggtgatcttaatcttaaaacaagaaggccatca
ggagaggctatgatgtcaaaagtagagtctaatgggaaagtacgtggtgactgcaatgat
ttgactaaggaaaagggtcgtttggaaaggcttgagaaggggctacagttgcttaaaagt
gcatggccatctgaaatggagcatccactatatgatgttgatcttgctataattctttgt
gaaatgaatgcatttaaagaagggcttttatatttatatgagaagatgaagctttataaa
gaggtgattgcttgttatatgcaggcccatgaccatgagggtctgattgcatgctgcaag
aggctgggggattcaggtaagggaggagatccatctctttgggcagatttgctaaagtac
tttggtgagcttggagaagaatgctccaaagaagtgaaggaagtcttgacttatattgaa
agggatgacatactgcctcctattattgttcttcagacgctctccaggaatccatgcctc
acactctctgttatcaaggattatattgctcgaaagcttgaacaggagtcaaagctaatt
gaagaggatcgtcgattcattgagaagtaccaggaagagacattggcaatgagaaaagaa
attcaggatcttaggacaaatgccagaatcttccagcttagcaagtgcactgcatgcact
ttcaccctagatctccctgctgtccacttcatgtgtatgcactcattccatcaacgttgc
ctaggagacaatgaaaaagaatgccctgaatgtgctcctgaatacagatctgttttggaa
atgaagagaaacttggagcagaattccaaagaccaagatcagttcttccagcaagtgaag
agttcaaaggatgggttttctgtgattgctgagtattttgggaagggaatcatcagcaag
accagtaatggacccacaggcagtctcagatctggcagcactgcttccagcagtggtttc
taa
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