Vitis vinifera (wine grape): 100266630
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Entry
100266630 CDS
T01084
Name
(RefSeq) transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100266630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvi03021
]
100266630
Transcription machinery [BR:
vvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
100266630
Prokaryotic type
Archaeal type
TFB
100266630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
RB_B
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
100266630
NCBI-ProteinID:
XP_002269045
UniProt:
D7TXT9
LinkDB
All DBs
Position
17:complement(join(19779138..19779271,19779453..19779529,19781422..19781510,19781633..19781763,19781855..19781984,19783465..19783489,19784617..19784969))
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AA seq
312 aa
AA seq
DB search
MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
LVATIKDRANEIYKKVEDQKSTRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEEF
DIRRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISRIIPSWY
AKEEDLRNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcgttttgcaccgattgtaagaagaacaccgaggtcgtgttcgatcactcg
gcgggcgacacggtgtgttccgagtgcgggcttgtgctggagtctcactcgattgatgag
acctccgagtggagaacgttcgcgaacgagtccggcgacaatgacccggtccgtgttggc
ggcccatctaacccgcttctcaccgacggtggcctttcgaccgttatagcgaagccgaac
ggggtttcgggagatttcttgtcgagttcgctagggcggtggcagaatcgggggtcgaat
ccggatcggggtctgattctggctttcaagaccatcgcgactatgtctgataggttgggc
cttgttgcgaccataaaggaccgtgctaatgaaatatataagaaggtagaagatcaaaag
tctactagaggaagaaatcaagatgctctgttggctgcctgtctctatattgcttgtcga
caagaagacaaaccgcgcactgtaaaggaaatttgctctgttgccaatggagccacaaag
aaagaaattggccgagcaaaagaatacatagtgaaacaactggaggctgagaagggccaa
tcggtagagatgggaaccatacatgctggagactttatgaggagattttgttccaatctt
gggatgaccaatcaagtggttaaagctgcccaagaagctgtgcagaagtctgaagagttt
gatataaggaggagccctgtatcaattgcagcagcagttatttacattataacccagctt
tcagatgagaagaagcttctccgagatatctcaatagctacgggagttgcagaaggaaca
atcagaaactcgtacaaggatctctatccccatatctcaaggataataccaagctggtat
gccaaggaggaggatctccgaaatctttgcagcccttaa
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