KEGG   Vitis vinifera (wine grape): 100266834
Entry
100266834         CDS       T01084                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100266834
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vvi03041]
    100266834
Spliceosome [BR:vvi03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100266834
 Complex B
    100266834
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_DUS3L RBD_AKAP-17A zf-CCCH_4
Other DBs
NCBI-GeneID: 100266834
NCBI-ProteinID: XP_059590917
LinkDB
Position
18:417584..418402
AA seq 272 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEEE
QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL
RRKLFGRYSGYGRSRSRSRSLSPRYRRDSDRRRSGDRGDYRGNGRRSGDKHGSDGGRRRH
GSPRRSRSPVREGSEERRARIELWNREREERQ
NT seq 819 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcttccatcttcggcaccgaaaaggaccgcgtgaactgtccgttt
tatttcaagatcggtgcttgtcgtcacggagatcgatgctcgcgcctccacaatcgcccc
acgatctccccaacgcttctcctctccaacatgtatcagcgtcccgacatgattactcca
ggtgtagacgctcaaggccagcctattgatcccaggaagattcaggaacactttgaggac
ttctacgaggatatctttgaagagctcggcaagttcggcgagatcgagagtctcaatgtt
tgtgataacctggccgatcacatgatcggtaatgtttatgttcagttcaaggaggaggag
caggcggccgctgctttgcaagctttgcaggggcggttctactccggccgccctatcatt
gcggatttttctcccgttaccgactttcgtgaagcaacgtgtcgccaatttgaggagaac
aattgcaaccgagggggttactgtaactttatgcatgtgaagcttattggaagggatttg
aggaggaagctatttgggaggtacagcggatatgggagaagtcgaagccggagcaggagt
ttgagtccacgttaccggagggattctgataggcgaaggagcggggaccgtggagattac
cgaggaaatgggcgacggagcggggataagcacgggagtgatgggggtcgaagaagacat
ggcagtcccaggcggagcaggagtccggtgagagaagggagtgaggagcgcagagcgagg
attgagctgtggaatcgagaaagagaggaaaggcagtga

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