KEGG   Vitis vinifera (wine grape): 100266965
Entry
100266965         CDS       T01084                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100266965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100266965
   03041 Spliceosome [BR:vvi03041]
    100266965
Messenger RNA biogenesis [BR:vvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     100266965
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100266965
Spliceosome [BR:vvi03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    100266965
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 NID
Other DBs
NCBI-GeneID: 100266965
NCBI-ProteinID: XP_010654539
UniProt: D7U018
LinkDB
Position
9:complement(join(2156682..2157113,2157208..2157377,2157457..2157559,2157683..2157846,2159411..2159451,2159618..2159769))
AA seq 353 aa
MDDLPEFRLFENDLDHNHRHSSGRGIEPINSVDSEGIGIQQLVDVRNSYSGKLFVGGISW
ETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVADKVLEEDHVIDGRAV
EVKKTVPREGMEVRGVSKTRKIFVGGIPSSLTEDELKDYFSSYGAIVENQIMLDHVTGRS
RGFGFVTFVSEDAVERLFSEGKTHELGGKLVEIKKAEPKRAGAEYNAGAAKFYGGRNGSQ
GGHGGKMGGGDAGYGGYTSYGGYDSYGMGYGGVAAGFYGAYCNPDGYGRYMYGYGFGAPM
YGCTGYGTLNGYGGAIATGYGGGGGKGYGNGIGHGGGKGHLGGNTVTGRYHPY
NT seq 1062 nt   +upstreamnt  +downstreamnt
atggatgatcttccagaattcaggctttttgagaatgacctagaccacaaccaccgacat
tcttccgggcgtggaatcgaaccgatcaatagtgtagatagtgaaggtattggcatacag
cagctggtcgatgttcgcaattcgtactctggaaaactttttgttggcggcatttcgtgg
gagacaagtgaagagatattcaccaattacttcagcaactatggagaaatcacagattct
gttataatgatggatagacataccggaaggccacgaggctttggatttataacatttgct
gatccagctgtggctgataaggttttggaggaagatcatgttatagatggcagagcagtt
gaagtgaagaagactgtccctagagagggtatggaagttagaggggtatcaaaaacaaga
aagatttttgtgggtggaataccatcatctttaacggaagatgagttgaaggactacttc
tcttcatatggtgccattgttgagaaccagattatgttggatcatgtaaccgggcggtca
aggggctttggatttgtcacttttgtgagtgaagatgctgttgaaaggcttttctctgag
ggaaaaactcatgaacttggaggaaaactggtggaaataaagaaggctgaaccaaaaaga
gctggtgccgagtacaatgctggtgcggcaaagttctatggtggcaggaatggttctcaa
ggtggacatgggggaaaaatgggtggaggggatgctggctatggtggctacactagctat
ggtggatatgacagttatggtatgggatatggtggagttgcagctggtttttatggtgct
tactgtaacccagatgggtatggcagatatatgtatggatatgggtttggtgcccccatg
tatggctgcactggttatgggactcttaatggttatggtggtgctattgctactgggtat
ggtggtggtggtggtaaagggtatggaaatggcattggacatggcgggggtaaaggacat
ctgggcgggaatactgtgaccggaagataccatccttactga

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