Vitis vinifera (wine grape): 100267231
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Entry
100267231 CDS
T01084
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100267231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100267231
Enzymes [BR:
vvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100267231
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
100267231
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_UBOX
FAIM1
Motif
Other DBs
NCBI-GeneID:
100267231
NCBI-ProteinID:
XP_002285659
UniProt:
D7SLE4
LinkDB
All DBs
Position
6:complement(join(1271140..1271460,1271716..1272102,1272458..1272676))
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AA seq
308 aa
AA seq
DB search
MAPGGGICKEVCESRSAFADYDVTTANLELRSSPFRKATTGVGGKHGMPSTSGVHELLEC
PVCMDLMHPPIHQCPNGHTLCSNCKARVHNCCPTCRFELGNIRCLALEKIAESLELPCRY
QIFGCHDIFPYYSKLKHEQNCQFRPYSCPYAGAECSVTGDIPLLVMHLKDDHKVDMHDGC
TFNHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFHLGMAPVYMAFLRFMGDENEAR
KFSYSLEVGGYGRKLIWQGVPRSIRDSHKMVRDSQDGLVIQRKLALFFSGGERQQLKLKV
AGRIWKEQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggctccaggaggtggcatctgcaaggaagtttgcgagtcccgctctgcatttgcagac
tatgatgtaacaacagcaaatttggaactaagaagttctcctttcagaaaagcaactact
ggtgttggtggaaagcatggaatgccatcaactagtggtgtgcatgagctgttggaatgc
cctgtttgcatggatctaatgcaccctcctattcaccagtgtccaaatggccacacttta
tgttccaactgcaaggccagagtgcacaactgttgcccaacttgtcgctttgagctaggg
aatataaggtgtttggctttggaaaaaattgcggaatcactggaacttccatgcagatac
caaattttcggttgtcatgatattttcccatattacagcaagctcaagcatgaacaaaac
tgccagtttcgcccatacagctgcccgtatgctggggctgagtgttctgtcactggcgat
attccgctccttgtcatgcacctcaaggatgatcacaaggttgatatgcatgatgggtgt
actttcaaccacagatatgtcaaatccaatccccaagaagtcgaaaatgccacatggatg
ctgactgttttcaactgttttggcaggcagttctgcttacactttgaggcattccatctg
ggaatggcacctgtttacatggcctttttgcggttcatgggcgacgaaaatgaagcaagg
aagttcagctatagtcttgaggtaggcggatatggcagaaagctaatatggcaaggagtt
cccaggagcattcgcgatagccataaaatggttcgggacagccaagatggactcgttatt
cagagaaagttagcacttttcttctctggtggcgagaggcagcaactgaagctgaaggtg
gccggccgtatttggaaagagcagtga
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