KEGG   Vitis vinifera (wine grape): 100267246
Entry
100267246         CDS       T01084                                 
Name
(RefSeq) ubiquitin receptor RAD23b
  KO
K10839  UV excision repair protein RAD23
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03420  Nucleotide excision repair
vvi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100267246
  09124 Replication and repair
   03420 Nucleotide excision repair
    100267246
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:vvi03051]
    100267246
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100267246
Proteasome [BR:vvi03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    100267246
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      100267246
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 CUE Rad60-SLD UBA_3 TECR_N UBA_RAD5A Herpes_UL32 Rad60-SLD_2 MmeI_C Ubiquitin_2
Other DBs
NCBI-GeneID: 100267246
NCBI-ProteinID: XP_010655132
UniProt: F6HBT7
LinkDB
Position
9:join(19754117..19754182,19755491..19755652,19759506..19759544,19759638..19759798,19759893..19759934,19766966..19767143,19767222..19767389,19767469..19767534,19768210..19768257,19768343..19768452,19772316..19772394,19772490..19772606)
AA seq 411 aa
MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLV
ENKVTEDGFLVVMLSKSKSIGATGTSSAQSASTPAPAAIPTPAPAPIPTPAPAPIATPAP
APIATPAPAPNPTAAAEAPVNAQAPRSISTSEVATDSVLADTYGQAASNIVSANHLEQTI
QQIMDIGGGTWDKETVTRALRAAYNNPERAVDYLYSGIPEAAEVAVPVAHFPADQETGGI
NSSTAAVAGSGAAPAAPASGVPNSSPLNMFPQETLSGAAGGGLGSLEFLRNNHQFQALRA
MVQANPQILQPMLQELGKQNPHLLRLIQEHHAEFLQLINEPLEGSEGDIFDQPEQELPHA
INVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAVNYLLENAGDYED
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgaagctcactgtcaagaccttgaagggaagccattttgagattagggttcagccctcc
gatacggttatggcggtaaagaaaaacattgaagatgtacaaggaaaagacaactatccg
tgtgggcaacaattattgattcataatggaaaggtcttgaaagatgaaactacactggtg
gagaacaaagttacagaagatggttttctagtggtcatgcttagcaagagtaaatccata
ggagcaacagggacctcatctgcccagtctgcatccactcctgcaccagctgctattccc
actcctgccccagctcctattcccactcctgctccagctcctattgccactcctgctcca
gctcctattgccactcctgctccagctcctaatcctactgctgcagctgaagctcctgta
aatgcacaggccccaaggagcatttctacatctgaggtggcaacagatagtgtgcttgct
gatacctatggtcaagctgcttcaaatatagtttctgctaatcatcttgagcaaactatt
caacaaataatggatataggcggtggaacctgggacaaggaaactgttacccgtgcactt
cgtgcagcttacaacaatccagagcgagctgtggattatttatattcagggattccagaa
gcagcagaagttgctgttccagtggctcatttccctgcagatcaagaaactggtggtatt
aattcatcaactgcagcggttgcagggtcaggtgcagcacctgctgcacctgcctctgga
gttcctaattcttctccccttaatatgtttcctcaggaaacgctttctggtgctgctggt
ggtggactaggatctcttgaatttctcagaaacaaccatcagtttcaagcactgcgtgcg
atggtacaagcaaacccgcaaattttacagcccatgcttcaggagcttggcaagcagaac
cctcatcttttaagattaattcaggagcaccatgcagagtttcttcagttgatcaatgaa
cctcttgaaggttctgaaggggatatatttgatcagcctgagcaagagttgccccatgct
atcaatgttactccagcagagcaggaggctattgagcggcttgaggcaatgggatttgac
agagctcttgtcattgaggcattcttagcttgtgatcgaaatgaagaattggcagtcaac
tatctgttggagaatgctggtgattatgaggactga

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