Vitis vinifera (wine grape): 100267297
Help
Entry
100267297 CDS
T01084
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
100267297
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vvi04040
]
100267297
Ion channels [BR:
vvi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
100267297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
100267297
NCBI-ProteinID:
XP_002268992
UniProt:
E0CUJ3
LinkDB
All DBs
Position
16:complement(join(24470964..24471662,24472525..24472761,24473428..24473539,24475338..24475615,24476556..24476768,24477507..24478068,24478693..24478721))
Genome browser
AA seq
709 aa
AA seq
DB search
MNYRQEKFVRFQDWSSERSSEGKIPINNGVRSGKIRLAINSVSGKFQRGLECGSERINSI
RRSLKSFSFRRNLEKGSGKKILDPQGPFLQKWNKIFVLSCIIAVSLDPLFFYIPVIDKLK
KCLSLDESLQITASVLRSFTDIFYILHIIFQFRTGFIAPSSRVFGRGVLVEDSWAIARRY
LSSYFLIDILAVLPLPQVVIWIIIPKLGGSKYMNTKRLLKFVVFFQYIPRVLRVRPLYKE
VTRTSGILTETAWAGAAFNLFLYMLASHVLGAFWYLFAIDRETTCWTKACGNDTSCIDSS
LYCKGTVNTTLFNASCPVIEPNTTVFDFGILLDALQSGVVESTDFPQKFFYCFWWGLQNL
SSLGQNLKTSTYVWEICFAVFISISGLVLFSFLIGNMQTYLQSTTIRLEEMRVKRRDAEQ
WMSHRLLPESLRERIRRYEQYKWQETRGVDEQNLLINLPKDLRRDIKRHLCLALLRRVPM
FEKMDEQLMDAMCDRLKPALYTEDSYIVREGDPVDEMLFVMRGKLSTMTTNGGRTGFLNS
DYLKAGDFCGEELLTWALDPHSTSNLPISTRTVLALSEVEAFALMADDLKFVASQFRRLH
SKQLRHTFRLYSHQWRTWAACFIQAAWRRYWRKKLEESLREEEDRLQDALAKAGGSSPSL
GATIYASRFAANALRALRRNKTRKARLPERISPILLQKPAEPDFTAEDQ
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaactaccgacaagagaagtttgtgaggttccaggattggagttcagagagaagtagt
gaagggaaaattcccataaacaatggagtaagatcagggaaaatcagactagcaataaac
tcagtttcagggaagttccagagaggtttggaatgtggttctgaacggattaacagcatt
agaaggtcattgaaatccttttctttcagaagaaatctggaaaagggttccggaaagaaa
attcttgatccacaggggccattcctccaaaagtggaataagatattcgttctatcatgc
attattgcagtctccctagatcctttgttcttttacatcccagtgattgataaattaaag
aaatgcctttcgttggacgaatcattgcagattacagccagtgttttgcgttccttcacc
gatatcttttatatactccatattatttttcaatttcgaactggttttattgctccttct
tctcgagtatttggaagaggtgttctagtagaagattcttgggcaatagcaaggagatat
ttgtcctcgtacttcctaatcgacatcctcgctgttcttcccctcccacaggtggtaatt
tggattatcattcccaaactaggaggctcaaaatacatgaatacaaagaggctgttgaaa
tttgttgtcttcttccaatacataccacgggtgctccgagttcgtccgttatacaaagaa
gtcacaagaacttctggcatactcactgaaactgcatgggctggagctgcattcaatctc
tttctttacatgcttgcgagtcatgtacttggagctttttggtacttgtttgctatagat
cgcgaaactacatgctggacaaaagcttgtggaaatgatacttcatgcattgatagttct
ctatattgtaaaggaacagtgaatacaacactttttaacgcttcatgtcctgtaatagaa
ccaaatacaacggtttttgattttggaatattacttgacgcccttcagtctggtgttgtg
gagtcaacagattttccacagaagttcttttactgtttttggtggggcctgcaaaatctg
agttctcttggtcaaaacctcaaaacaagcacctatgtctgggaaatttgctttgcagtg
ttcatttccatctctggcttggttttattttcatttcttattggaaatatgcagacatat
ctgcagtccacaaccataagattggaggagatgagagtgaaaaggcgagatgcagaacag
tggatgtctcatcgcctgcttcctgagagtctgagggagcgaatcagaaggtatgaacag
tacaagtggcaagaaaccagaggtgttgacgaacagaatctactcattaatcttcccaag
gaccttagaagggacataaaacgccatctctgcttggctctgctcaggagagtgccaatg
ttcgaaaagatggatgagcaactgatggatgcaatgtgtgaccgtctcaagccagcactg
tacacagaagatagctacatcgtccgggagggggacccagtcgatgagatgctctttgtc
atgcgaggcaagctatccaccatgacaaccaatggtggaaggactggcttcttgaactct
gattatctgaaagccggtgacttctgtggagaagaacttctcacatgggcactggacccc
cactcaacatcaaaccttcccatttcaaccagaaccgtcctagccctctccgaagttgaa
gcctttgctctaatggctgacgacctgaagtttgttgcctcccaattccgaagactccac
agcaagcagctccgccacaccttcaggctctactcccaccagtggaggacttgggctgcc
tgtttcatacaagccgcctggcgccgctactggaggaagaagctggaagagtcccttcgg
gaagaggaggataggttgcaggacgcattggccaaggcaggtgggagctcacctagtcta
ggtgccaccatttatgcatcccgattcgcagccaatgctctccgtgctttgcggcgtaac
aagacacgaaaagcaaggttgccagagagaatatcaccgatactgcttcagaaaccggcg
gagccggattttactgctgaagatcaatag
DBGET
integrated database retrieval system
