KEGG   Vitis vinifera (wine grape): 100267539
Entry
100267539         CDS       T01084                                 
Name
(RefSeq) splicing factor-like protein 1
  KO
K13095  splicing factor 1
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100267539
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vvi03041]
    100267539
Spliceosome [BR:vvi03041]
 Complex A
  Other components
   Complex A specific factors
    100267539
SSDB
Motif
Pfam: SF1-HH KH-I_KHDC4-BBP RRM_1 KH_1 KH_12 zf-CCHC eIF3g RRM_5 PHD_4 KH_PNO1_2nd Helveticin_J zf-CCHC_2
Other DBs
NCBI-GeneID: 100267539
NCBI-ProteinID: XP_019072711
UniProt: A0ABY9DY20
LinkDB
Position
19:1537527..1539911
AA seq 794 aa
MDHPPPPIQNLDPQPPPPPETLIPSYQYPSPPSQSLDSSFQNPSKTLASDHPDSISPNSD
SQNLASFSNNGQTHFEGPKFDLQKPLVSENGVTNTQSGTDKDYSGGEEETTSRRRRRSRW
DPPSDSGNQTAGEAAEGTGARKRKSRWADDEPKPLIQLPDFMKDFTGGIEFDPEIQALNS
RLLEISRMLQSGLPLDDRPEGARSPSPEPIYDNMGIRINTREYRARERLNRERQEIISQI
LKRNPAFKPPADYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMERETGAKIVIR
GKGSVKEGRLQQKRDLKPDPSENEDLHVLVEADTQEALDAAAGMVEKLLQPVDEVLNEHK
RQQLRELAALNGTIRDEEYCRLCGEPGHRQYACPSRTSTFKSDVLCKICGDGGHPTIDCP
VKGTTGKKMDDEYQNFLAELGGTVPDSLIKPNNALPITGSSGSGSNPPWSNNAGGTAQAG
LGANGAKPIKEYDDTNLYIGYLPPTLEDDALIRLFSPFGDIVMAKVIKDRVTGLSKGYGF
VKYSDVQQANSAIASMNGYRLEGRTIAVRVAGKPPQPAVPPGPPPPAMPTYPSSNQAVGA
YPSQQFTAGGPLGNTPPPSYAPGAPVPWGPVPPPYAPYPPPPPGSSLYTPVPGQPVPPYG
VQYPPPPPPTQSVSAGAPAQTVVSSEAQQNFPPGVQSESGSSVQSVPTSVYGSSLSAIPP
NPQPAYSTSSYGYSYYGVAPPPPLPVPYPMADQSQNMGNAPWSSAPPVPPPVPPAEKKTH
GTDAEYEKFMAEMK
NT seq 2385 nt   +upstreamnt  +downstreamnt
atggatcatcctccgccaccaatccaaaacctagatcctcagcccccacctcctcctgaa
accctaattccttcctatcaatacccatctccaccttcccaatcccttgattcctccttt
caaaacccctccaaaacccttgcttcagatcatcctgattcgatttctccaaattctgat
tctcaaaacctcgctagtttttccaataatggccagacccatttcgaagggcccaagttc
gacctccagaagcccttggtttctgaaaatggcgtcaccaacacccagagcggcaccgac
aaggactactccggcggcgaggaggaaactaccagtcgtcggcgcaggcggagccgctgg
gatccgccgtccgattctggaaaccaaacagccggtgaagcagccgaaggtaccggggcc
aggaagaggaaatcgaggtgggcggatgatgagccgaagccattgattcaattgccggat
ttcatgaaagatttcaccggaggtattgaatttgaccctgaaattcaagctttgaatagt
aggcttcttgagattagtcgcatgttgcaatctggtttgccgttggatgatcggcctgag
ggggcgaggtcgccttcgcctgagcctatatatgataatatgggaattaggatcaacacc
agagagtatcgggctcgcgagagattgaatcgtgagagacaggaaattatatcacaaatc
ttgaaacgaaacccggcatttaagcccccggctgattataggcccccaaagcttcagaag
aagctttatataccaatgaaagaatatccgggctataactttattgggcttataattgga
ccaagggggaacacacagaaaagaatggagagggagacgggggcaaaaattgtgattcgg
ggaaaagggtcagtgaaagaagggaggttgcaacagaagagggatttaaaacctgatcct
tctgagaacgaggatttgcatgtattggttgaggcggatacacaggaagcacttgatgca
gctgccgggatggtggagaaattattgcagccagttgatgaggtgttgaatgagcataag
aggcaacagcttagggagttagcagccctaaatgggacaataagggatgaggagtactgt
agattgtgtggagagccggggcaccggcaatatgcttgtccttcacgaacttcgacgttt
aaaagtgatgtactatgtaagatatgcggtgacggtgggcatcctaccattgattgtccg
gtgaaggggacaacagggaagaaaatggatgatgagtatcagaactttttggctgagctg
ggagggacagtaccagattctttgataaagccaaacaatgcattgccaattacaggttca
agtggttctggtagcaatcctccttggtctaacaatgctggtggtacagcacaagctggc
ttaggggcaaatggagccaaacccattaaggaatatgatgatacaaacttgtacattggg
tatttgccacctactcttgaagacgatgctttgattaggttgttttcaccctttggtgat
attgtgatggctaaggttattaaggatagggttactggattgagcaaagggtatggtttt
gtcaagtattctgatgttcaacaagccaatagtgcaattgccagtatgaatggttatcgt
ttagagggaagaacaattgctgtgagggttgcaggtaagcctcctcagcctgctgtccct
ccaggtcctccccctcctgcaatgcctacatatccaagttcaaatcaggctgttggtgcc
tatccatcccagcaatttaccgcaggtggtccccttgggaatactccaccaccgagctat
gcccctggtgctccagttccatggggaccggttcctcctccttatgccccttaccctcct
cctccccctgggtcaagcttatacactccagtcccaggtcaacctgtgcctccttatggt
gtgcaatatcctcctcctcctcctcctacacagtcagtttctgctggtgccccagctcag
actgtggtgtctagtgaagcacaacagaatttccctccaggagtgcagtctgaaagtggt
tcttctgttcaatctgtacctaccagtgtttatgggagctccttatctgcaataccacca
aatcctcaacctgcatattcaacatcttcatatggttactcttattatggtgttgctcct
cctccacctcttcctgtaccttatccaatggcagatcaatcgcagaacatgggaaatgcg
ccttggagctcggctccaccagtgcctccacctgttccaccagcagaaaagaaaacccat
ggtactgatgcagaatatgagaaattcatggcggagatgaaatga

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