Vitis vinifera (wine grape): 100267539
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Entry
100267539 CDS
T01084
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100267539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100267539
Spliceosome [BR:
vvi03041
]
Complex A
Other components
Complex A specific factors
100267539
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
zf-CCHC
eIF3g
RRM_5
PHD_4
KH_PNO1_2nd
Helveticin_J
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
100267539
NCBI-ProteinID:
XP_019072711
UniProt:
A0ABY9DY20
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Position
19:1537527..1539911
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AA seq
794 aa
AA seq
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MDHPPPPIQNLDPQPPPPPETLIPSYQYPSPPSQSLDSSFQNPSKTLASDHPDSISPNSD
SQNLASFSNNGQTHFEGPKFDLQKPLVSENGVTNTQSGTDKDYSGGEEETTSRRRRRSRW
DPPSDSGNQTAGEAAEGTGARKRKSRWADDEPKPLIQLPDFMKDFTGGIEFDPEIQALNS
RLLEISRMLQSGLPLDDRPEGARSPSPEPIYDNMGIRINTREYRARERLNRERQEIISQI
LKRNPAFKPPADYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMERETGAKIVIR
GKGSVKEGRLQQKRDLKPDPSENEDLHVLVEADTQEALDAAAGMVEKLLQPVDEVLNEHK
RQQLRELAALNGTIRDEEYCRLCGEPGHRQYACPSRTSTFKSDVLCKICGDGGHPTIDCP
VKGTTGKKMDDEYQNFLAELGGTVPDSLIKPNNALPITGSSGSGSNPPWSNNAGGTAQAG
LGANGAKPIKEYDDTNLYIGYLPPTLEDDALIRLFSPFGDIVMAKVIKDRVTGLSKGYGF
VKYSDVQQANSAIASMNGYRLEGRTIAVRVAGKPPQPAVPPGPPPPAMPTYPSSNQAVGA
YPSQQFTAGGPLGNTPPPSYAPGAPVPWGPVPPPYAPYPPPPPGSSLYTPVPGQPVPPYG
VQYPPPPPPTQSVSAGAPAQTVVSSEAQQNFPPGVQSESGSSVQSVPTSVYGSSLSAIPP
NPQPAYSTSSYGYSYYGVAPPPPLPVPYPMADQSQNMGNAPWSSAPPVPPPVPPAEKKTH
GTDAEYEKFMAEMK
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggatcatcctccgccaccaatccaaaacctagatcctcagcccccacctcctcctgaa
accctaattccttcctatcaatacccatctccaccttcccaatcccttgattcctccttt
caaaacccctccaaaacccttgcttcagatcatcctgattcgatttctccaaattctgat
tctcaaaacctcgctagtttttccaataatggccagacccatttcgaagggcccaagttc
gacctccagaagcccttggtttctgaaaatggcgtcaccaacacccagagcggcaccgac
aaggactactccggcggcgaggaggaaactaccagtcgtcggcgcaggcggagccgctgg
gatccgccgtccgattctggaaaccaaacagccggtgaagcagccgaaggtaccggggcc
aggaagaggaaatcgaggtgggcggatgatgagccgaagccattgattcaattgccggat
ttcatgaaagatttcaccggaggtattgaatttgaccctgaaattcaagctttgaatagt
aggcttcttgagattagtcgcatgttgcaatctggtttgccgttggatgatcggcctgag
ggggcgaggtcgccttcgcctgagcctatatatgataatatgggaattaggatcaacacc
agagagtatcgggctcgcgagagattgaatcgtgagagacaggaaattatatcacaaatc
ttgaaacgaaacccggcatttaagcccccggctgattataggcccccaaagcttcagaag
aagctttatataccaatgaaagaatatccgggctataactttattgggcttataattgga
ccaagggggaacacacagaaaagaatggagagggagacgggggcaaaaattgtgattcgg
ggaaaagggtcagtgaaagaagggaggttgcaacagaagagggatttaaaacctgatcct
tctgagaacgaggatttgcatgtattggttgaggcggatacacaggaagcacttgatgca
gctgccgggatggtggagaaattattgcagccagttgatgaggtgttgaatgagcataag
aggcaacagcttagggagttagcagccctaaatgggacaataagggatgaggagtactgt
agattgtgtggagagccggggcaccggcaatatgcttgtccttcacgaacttcgacgttt
aaaagtgatgtactatgtaagatatgcggtgacggtgggcatcctaccattgattgtccg
gtgaaggggacaacagggaagaaaatggatgatgagtatcagaactttttggctgagctg
ggagggacagtaccagattctttgataaagccaaacaatgcattgccaattacaggttca
agtggttctggtagcaatcctccttggtctaacaatgctggtggtacagcacaagctggc
ttaggggcaaatggagccaaacccattaaggaatatgatgatacaaacttgtacattggg
tatttgccacctactcttgaagacgatgctttgattaggttgttttcaccctttggtgat
attgtgatggctaaggttattaaggatagggttactggattgagcaaagggtatggtttt
gtcaagtattctgatgttcaacaagccaatagtgcaattgccagtatgaatggttatcgt
ttagagggaagaacaattgctgtgagggttgcaggtaagcctcctcagcctgctgtccct
ccaggtcctccccctcctgcaatgcctacatatccaagttcaaatcaggctgttggtgcc
tatccatcccagcaatttaccgcaggtggtccccttgggaatactccaccaccgagctat
gcccctggtgctccagttccatggggaccggttcctcctccttatgccccttaccctcct
cctccccctgggtcaagcttatacactccagtcccaggtcaacctgtgcctccttatggt
gtgcaatatcctcctcctcctcctcctacacagtcagtttctgctggtgccccagctcag
actgtggtgtctagtgaagcacaacagaatttccctccaggagtgcagtctgaaagtggt
tcttctgttcaatctgtacctaccagtgtttatgggagctccttatctgcaataccacca
aatcctcaacctgcatattcaacatcttcatatggttactcttattatggtgttgctcct
cctccacctcttcctgtaccttatccaatggcagatcaatcgcagaacatgggaaatgcg
ccttggagctcggctccaccagtgcctccacctgttccaccagcagaaaagaaaacccat
ggtactgatgcagaatatgagaaattcatggcggagatgaaatga
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