Vitis vinifera (wine grape): 100267614
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Entry
100267614 CDS
T01084
Name
(RefSeq) transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100267614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvi03021
]
100267614
Transcription machinery [BR:
vvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
100267614
Prokaryotic type
Archaeal type
TFB
100267614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
RB_B
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
100267614
NCBI-ProteinID:
XP_002284342
UniProt:
D7THT6
LinkDB
All DBs
Position
8:join(23435854..23436206,23437323..23437347,23438947..23439076,23439168..23439298,23439421..23439509,23441640..23441716,23442007..23442140)
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AA seq
312 aa
AA seq
DB search
MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
LVATIKDRANEIYKKVEDQKSTRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEEF
DIRRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISKIIPSWY
AKEEDLRNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcgttctgcaccgactgtaagaaaaacaccgaggtcgtgttcgatcactcg
gcgggcgacacggtgtgttccgagtgcgggcttgtgctagagtctcactcgattgatgag
acctccgagtggagaacgttcgctaacgagtcgggcgacaatgacccggtccgtgttggc
ggcccatccaacccgcttctcactgatggtggcctttctaccgttatagcgaagccgaac
ggggtttcgggcgatttcctgtcgagttcgttagggcgatggcagaatcggggttcgaat
cctgatcggggtctgattctggctttcaagaccatcgcgactatgtctgataggttgggc
cttgttgcgaccataaaggaccgcgctaatgaaatatataagaaggtagaagatcaaaag
tctactagaggaagaaatcaagatgctctgttggctgcctgtctctatattgcttgtcga
caagaagacaaaccacgcaccgtaaaggaaatttgctctgttgccaatggagccacaaag
aaagaaattggccgagcaaaagaatacatagtgaaacaactagaggctgagaagggtcaa
tcggtagagatgggaactatacatgctggagacttcatgaggagattttgttccaatctc
gggatgaccaaccaagtggttaaagctgcccaagaagctgtgcagaagtctgaagagttt
gatataaggagaagcccagtatcaattgcagcagcagttatttacattataactcagctt
tcagatgagaagaagcttctccgagatatctcaattgctacgggagttgcagaaggaaca
atcagaaactcctacaaggatctctatccccacatttcaaagataataccaagttggtat
gccaaggaggaggatctcagaaatctttgcagcccttga
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