Vitis vinifera (wine grape): 100267752
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Entry
100267752 CDS
T01084
Name
(RefSeq) vacuolar protein sorting-associated protein 36 isoform X4
KO
K12190
ESCRT-II complex subunit VPS36
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100267752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vvi04131
]
100267752
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vvi04147
]
100267752
Membrane trafficking [BR:
vvi04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
100267752
Exosome [BR:
vvi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100267752
Exosomal proteins of colorectal cancer cells
100267752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
100267752
NCBI-ProteinID:
XP_002270954
LinkDB
All DBs
Position
13:complement(join(19050037,19050299..19050352,19051689..19051773,19051859..19051994,19060363..19060432,19060619..19060676,19060783..19060876,19063796..19063996,19065349..19066158))
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AA seq
502 aa
AA seq
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MFTFFTHFQISESKQAFSEELFDFKAQAGQNRRSALSKPSERVGVRFRLPPLFSVFSHRR
SMAGKWLPAAELTASGRPVLCPGEIESSLLSSVDLHSEENPNFPNFKSGILILTTHRLLW
ISDSAPGTATAVAVPLAAINHIFPLKKSIKSMFASPRIRFQVSAAPDGKVDAGGSNLAVI
TLVLRGKGDHEAFVSKFWEAWRARAWESETPKSGSSSGTGGSGSREGESGWSSNGLRLAG
VSGILRKEQEMWESTDKSLQEAFQDLNALMSKAKEMVMLAEKMRQKLLSGPTTQPGANDE
EMGSKQEMQDWMLSVGIASPVTKESAGALYHQQLSRQLADFVKIPLEKAGGMINLIDIYC
LFNRARGTELISPEDLLQACSIWEKFDVPVMLRKFDSGVMVIQNKSHTDEEVFARIKSLA
LKPDALKTGLSASDAAMTLGIAPAMAKEHLLTAESKGFLCRDVSADGFQFYINFFHEIDP
SDLYFVKDYGIYDTWVKAALAS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgttcacatttttcacacattttcaaatcagcgaatcaaaacaagccttttcagaggag
ctctttgacttcaaggctcaagccggtcagaacaggcgttccgctctttccaaacccagt
gagcgggttggagtgagatttcgattgccgccactcttctctgtattttcacaccggcga
tccatggccggaaaatggctcccggcggccgagctcaccgcaagcggacgcccagttctc
tgccccggagaaatcgagagctccctcctctcctccgtcgaccttcattctgaagaaaac
cccaatttccccaacttcaagtccggcattctcatcctcaccactcaccgcctcctttgg
atctctgactccgcccctggcactgcgaccgcggtggccgttcctcttgctgccattaac
cacatcttccccctcaagaagtccatcaagtctatgttcgcctccccaaggattcgcttc
caggtctccgcggccccggacggcaaagtggatgccggtggatcaaatctggccgtgatc
acgctggtgctgagagggaagggcgatcacgaagctttcgtgagcaagttttgggaggcg
tggagggctcgggcttgggaaagcgagactccgaaatcgggttcgagttcgggcaccgga
gggtctggttcgagggagggagagtccgggtggtctagtaatggattgcggttggcgggg
gtttcggggattctgaggaaggagcaggagatgtgggagagcacagataagagcttgcag
gaggcttttcaagatttgaatgctctcatgagtaaggctaaagagatggtgatgctagct
gagaaaatgaggcagaaacttttatctggtccaacaactcaacctggggcaaatgatgag
gaaatgggttccaaacaagagatgcaagattggatgttgagtgttggtattgcatcccca
gtgacaaaagagtctgctggtgctctttatcaccaacaactttcccgccagttggcagat
tttgtcaaaattccacttgagaaagctggaggaatgattaatcttatagacatctattgt
cttttcaatcgcgcccgtggcacagaattaatatcgccagaggatttattacaagcgtgc
tctatttgggagaagtttgatgttccagtgatgcttcggaagtttgatagtggagtcatg
gtcatccaaaacaagtctcacacggatgaagaggtgtttgctaggatcaagtcccttgcc
ctcaagcctgatgctctcaaaactgggttgagtgcaagtgatgctgcaatgacattaggg
attgctccagctatggccaaggagcatcttctaactgctgagagtaaaggttttctatgc
agagatgtaagcgcagatggatttcaattttatattaatttctttcatgaaattgatcca
agtgatttatactttgtgaaagattatgggatctatgacacgtgggttaaggctgccctt
gcttcttga
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