Vitis vinifera (wine grape): 100267766
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Entry
100267766 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100267766
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vvi03016
]
100267766
Enzymes [BR:
vvi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
100267766
Transfer RNA biogenesis [BR:
vvi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100267766
Prokaryotic type
100267766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
100267766
NCBI-ProteinID:
XP_059590332
LinkDB
All DBs
Position
18:join(1468442..1469847,1469923..1470232)
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AA seq
571 aa
AA seq
DB search
MEIQEPDPKRPKMSQTTTTSDDEDCDTTTATKKPRYKRRKIAIFFAYCGVGYQGMQKNPG
AKTIEGDLEEALFFSGAVPEQDRGHPKRFDWARSARTDKGVSAVGQVVSGRFYIDPPGLV
ERLNSNLPPQIRIFGFKRVTASFNAKKFCDRRRYVYLIPVFALDPSSHPDRESVLASVGS
ENELVKCLECSERGRKVVGIMGKRSFESKVSVDDREDVEGESKNIVQLGIPSNDEAAIVN
SEVQEEIKATSNNNNIDANNSISETIKEEAAKLSSEVDAEIINGENSISEPVKVGAAILK
SEAKEESMASSDNRHDGNSISQPIKEGRCFQDNETSESTPDSRASAQNEPGVSHSEQSDK
GENKLEKGSGFCYGDKERERFNRILGHYVGTHNFHNFTTRIKAEDPSAQRFIVSFDGNTI
VTVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNVAPESLLETALLKDVNINVPTAPE
VGLYLDECFFSSYNKKWRDSHEEVSMKAYAEEAEEFKMKHVYSHIAATEHKEGVVALWLH
SLNHRNYPDLCIGDNGAASDGKNGEEETMAD
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggaaatccaggagccggaccccaaaagaccaaaaatgtcccaaaccaccaccacctcc
gatgacgaagactgtgacaccaccaccgccaccaaaaagccgagatacaagcgccgcaag
atcgccatcttcttcgcatactgtggcgtgggctaccaaggcatgcagaagaaccccgga
gccaaaaccatcgaaggggacctcgaagaagccctcttcttctcgggcgccgtccccgag
caagaccgcggacaccccaagcggttcgactgggctcggtccgctcgaaccgataagggc
gtcagcgcagtgggtcaagtagtctcaggccggttctacattgatccacccggcctagtc
gagcgcctgaattcgaatctccctccccagattcggatctttgggtttaagcgcgtgacg
gcgtcgtttaatgccaagaaattctgtgatcgcaggaggtatgtgtatcttattccagtg
tttgctcttgatcccagttcgcatcctgatagagagagtgtcttggctagtgtggggtct
gaaaatgagcttgttaagtgcttggagtgttctgagagaggtcgtaaagtcgtaggtata
atgggtaaacgcagtttcgaatcgaaagtttcagtagatgatagggaagatgtagaaggt
gaatctaaaaacattgttcagttgggcattccatcgaacgatgaagctgcaatcgtgaac
tctgaagttcaagaagagattaaggccacttcaaacaacaataacatagatgctaataat
tcaatttctgaaacgataaaggaagaagccgcaaaactgagctctgaagttgatgcagag
attatcaatggtgaaaattcaatttctgaacccgtcaaggtaggagctgcaatattaaaa
tctgaagctaaagaagagagtatggcttcctcggacaacagacatgatggtaattcaatc
tctcaacctataaaggaaggccggtgttttcaggacaatgagacctctgaatcgacccct
gatagtagggcttctgcacaaaacgagcctggtgtttctcattctgaacagtctgacaag
ggagagaataagcttgagaagggaagtgggttttgttatggcgacaaggagagggagaga
ttcaatagaattctgggtcattatgttggaactcataacttccacaacttcaccaccaga
attaaagccgaggatccctctgcccaacgcttcattgtttcatttgatggcaacaccatc
gtcactgtagaaggcatcgaatttgtgaagtgtgaagttgtggggcagagcttcatgctt
catcagattcggaagatgattggtcttgcagtagcaatcatgagaaacgttgcccctgag
tccttgctagaaacagctctactaaaggatgttaacatcaatgtgcccacggcccctgaa
gttggcttatacctggacgagtgtttcttctcgtcctacaacaagaaatggagagacagc
catgaagaggtatccatgaaagcctatgcagaagaggcagaagagttcaagatgaagcat
gtctactcccatatcgcagcaacagaacataaggaaggagttgtggccctctggctgcat
tctctgaaccaccgcaactaccccgatttatgcattggggacaatggagctgcctctgat
gggaaaaatggtgaagaggaaacaatggccgactga
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