Vitis vinifera (wine grape): 100268010
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Entry
100268010 CDS
T01084
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvi03000
]
100268010
04121 Ubiquitin system [BR:
vvi04121
]
100268010
Transcription factors [BR:
vvi03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
100268010
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
100268010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
K_trans
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
100268010
NCBI-ProteinID:
XP_059590156
LinkDB
All DBs
Position
17:join(1955622..1958904,1960810..1960890,1960962..1960993,1962034..1962259,1962341..1962583,1962726..1962779,1962886..1962936,1963414..1963674,1963815..1963867,1963955..1964075,1964165..1964422,1964718..1965790)
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AA seq
1911 aa
AA seq
DB search
MSFQARNDRRDRARFPNQTGRQAWVPRGSAPHAVNSHPNPSSGFNSNLNGIGGDSNFSSA
PPDGPSRGGFASRNYAARPSNQRRERVDDQEVKGPKDLNSNLPQLVQEIQEKLMKGSVEC
MICYDMVRRSAPIWSCSSCYSIFHLNCIKKWARAPTSTDFSVEKNQGVNWRCPGCQSVQL
TASKEIRYVCFCGKRSDPPSDLYLTPHSCGEPCGKPLNREIIGSGESNEDFCPHVCVLQC
HPGPCPPCKAFAPPRLCPCRKKIITTRCSDRKSVLTCGQRCDKLLECGRHRCERMCHVGA
CDPCQVLVNASCFCKNTVEVVLCGSMAVKGELKSEDGVFSCRWICGKKLFCGNHDCDEIC
HPGPCGDCNLMPSRIRTCYCGKTSLQEERRSCLDPIPTCLQICGKPLPCGMHFCKDTCHA
GDCAPCLVLVNQKCRCGSTSRTVECYKTTAEEKFTCEKPCGRKKNCGRHRCSERCCPLSN
SGNVLFGDWDPHLCSMTCGKKLRCGQHSCENLCHSGHCPPCLETIFTDLTCACGRTSIAP
PLPCGTPTPSCQHPCSVPQPCGHLSSHSCHFGDCPPCSVPIAKECIGGHVVLRNIPCGSR
DIRCNKLCGKTRQCGMHACGRTCHPPPCDSSCASGSGLRSSCGQTCGAPRRDCRHTCTAP
CHPSSPCPDSRCNFPVTITCSCGRISATVPCDAGGSSVGFNGDTVSEASIIQKLPVPLQP
VEANGRKIPLGQRKLACDDECAKQERKRVLADAFDITPPNLDALHFGETSVVSELLADLF
RRDPKWVLSVEERCKFLVLGKTRGTTSSLRVHVFCPMLKEKRDAVRLIAERWKLSVNSAG
WEPKRFIVVHVTPKSKAPARVLGAKGSTPLNVLNPPVFDPLVDMDPRLVVSLLDLPRDAD
ISALVLRFGGECELVWLNDKNALAVFSDPARAATAMRRLDHGSVYHGAVVIPQNGIAPVA
SQGANAWGGSAGGMAKEGRNQWKKAVVQESGWSESSWGGEDWSAGSVDLQASVWKGKESP
IVASVNRWNVLEPELVSSSSTSSVKTEDSGKRVGNQSVPGLEPSSSHSNSAETEGDTSEA
DASEVVDDWEKAYEFSFGVFKFTNNPIKVNCFITWVKDLAQVIGALAHTFGWKETWRHTF
LLAFQSLGIVYGRLSTAPLYVFMSIPREDIISEQRVYELFSFVFWTMTIIPLLKYAFIVL
RADDNGEGGTFALYSLLCRHAKVGLHPNDRSANEVMKSISAPASKTKVESRARRAIEKHK
SSHYLMLFLALFGSCMVIGDGVLTPAISVLSASSGFERSMSHIAHKIASSQRVGDDIEKA
FKRYVPVPFACAILVGLFTLQHYGTHKIGFLFAPIIVIWLFFISGVGLYNIFYSDHQIIY
AVSPVYMYRFMRNFDHQGWRSLGSILLSVAGSEAMFADLGHFSKKSLKITFVCLIYPALI
LCYAGQAAFISKNWRVFEDVTYLSESVPGAFLRHIVVLLSLLASAVGSQATITASFSVIN
QCLALGCFPRVKVIHTSDTMNGRVYIPDVNWLLMILSLGIVIAFQDIARIGNATGLAIIS
GMLVTTCLMSLVITLYWEKSLFVSACFLLSFGLVEIMYLSACMSNFHKGAWYLVVLFVFS
MTIMLSWHYGTMKKYEFDLQNKVSMEWITVMSPGLGVSRVPGIGFIYTDIVSGIPAFFSH
FITNLPAYHQVLIFVSFKSLPVPCVPQKQRYLIGRLGAKDYKVYRCIVRYGYCDNIRDTD
DFEDQIIRCIGEFIALEENDLESLTSPEGRMIVVGNPMLDGNALVPIPEMNSNLASPRLS
NNGTQRTLSSDSIESASALVTRRKVRFMLPPESPRMQVSVRAELRELVDARESGTAYFLG
QSHLKVRDGSSFLKRFLIMTYVFLDKNCREPPVALNIPHAALVEVGMVYTI
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atgagttttcaagctcgaaatgatcggagagatagagctagatttcccaaccaaaccggt
aggcaagcatgggtccctagaggatctgcccctcacgctgtgaattcacacccgaacccg
tcatctggtttcaattccaatctgaacgggattggtggggactcaaatttcagttccgca
ccaccagatggtccgagtagaggaggttttgcgtcaaggaattatgcagctagaccttct
aatcagagaagggagagggtggatgatcaggaggtgaaggggccgaaggacttgaattca
aatttgccgcagcttgtgcaggaaatccaagagaaattgatgaaggggagtgttgaatgt
atgatttgttatgatatggtcaggagatcagctcccatttggtcttgctcgagctgttat
tcaattttccatttgaattgtatcaagaaatgggcccgggcgcctacctctactgatttt
tctgtagagaagaatcagggggtcaactggcgatgccctggatgtcaatcagtgcagctc
acagcttcaaaggagattcggtatgtttgcttctgtggaaagaggtctgatccgccttct
gatttgtatttgacgccccattcttgtggagagccttgtgggaagccactcaatcgagag
attataggttctggtgagagtaatgaggatttttgcccccatgtctgtgtcttgcaatgc
cacccaggtccatgccctccgtgtaaggcttttgcaccgcctcggttgtgcccttgtcgg
aagaaaataattacaacacgatgctctgatcggaaatctgttcttacttgtggtcagcgt
tgtgataaactcctcgaatgtgggcgtcaccgttgtgagcgcatgtgccatgttggtgct
tgtgatccttgtcaggttctggtcaatgcctcttgcttttgcaagaacacggtggaggtt
gttctttgtgggtccatggctgtgaagggagaactaaaatcagaggatggtgttttctca
tgtcgttggatctgtggaaagaagcttttctgtggaaatcacgattgtgatgaaatttgc
catccagggccatgtggggattgcaacttaatgccaagcaggattaggacatgctattgc
ggtaaaacatcattgcaggaggaacggcgtagctgtttggacccaattccaacctgtctt
cagatctgtggcaagcccctcccttgtggaatgcacttctgtaaggacacatgccatgct
ggggattgtgcaccatgtttggtgcttgtcaatcaaaaatgccgttgtggatcaacatct
cgaactgtagaatgctacaaaaccacggcagaggagaaatttacctgtgagaaaccttgt
gggcggaagaagaactgtggaaggcaccgttgtagtgaacggtgctgtcctctctctaat
tctggcaatgttctctttggtgattgggatccgcacttatgttcaatgacatgtggaaag
aaactaaggtgtggacagcactcttgtgaaaatctttgccacagtggccattgccctcct
tgccttgaaacaatctttactgatttaacatgtgcatgtgggagaacttcaatcgctcct
ccattgccttgtggtacccccactccatcatgtcagcacccatgctcagttcctcagcca
tgtggtcatttatcttctcacagctgccactttggagactgcccaccttgttcagttcct
atagccaaggagtgcattggtggacatgtggttctcaggaacatcccttgtgggtcaagg
gatattagatgtaacaagctttgcggcaagaccaggcaatgtggtatgcatgcttgtggg
agaacttgtcaccctcctccttgtgattcttcctgtgcatctggctctggtttgaggtct
tcatgtggccagacatgtggtgctccgaggagagattgcaggcatacatgcactgcccct
tgtcacccttcatctccttgtcctgattcaagatgtaatttccctgtcacaatcacttgt
tcttgtggccgaataagtgcaactgttccttgtgatgctggaggcagcagtgtggggttt
aatggtgatacagtctctgaagcttccattatccaaaagttgccagtaccacttcaacct
gtggaagcaaatggcaggaaaattcctcttggacagaggaagcttgcttgtgatgatgaa
tgtgcaaaacaggaacggaaacgagttcttgcagatgcttttgatatcacccccccaaac
ttggatgcccttcattttggtgagacttctgttgtttctgaattgcttgcagatcttttt
aggcgtgatccaaagtgggtgttgtctgtggaagaaagatgcaagtttttggtcctaggg
aaaaccagaggaactaccagcagtcttagggttcacgttttctgtccaatgctgaaggaa
aagagagatgctgtaaggctgatagctgagaggtggaagctttcagttaattctgctggg
tgggagccaaagcgttttattgttgttcatgttacgcccaaatccaaagccccagctcgt
gtgcttggcgctaagggttccacccccttaaatgtgttaaatcctccggtttttgatcca
ttggtagatatggatcccaggcttgttgtttctttacttgatttgccaagggacgcagat
ataagtgcattggttctgaggtttggtggggagtgtgaattagtttggttgaatgacaag
aatgcgctggccgtgtttagtgatccagcccgagcagcaactgcgatgaggaggttagat
catggatcagtgtatcatggtgctgttgtgatccctcaaaatggcattgcaccagtggct
tcacaaggtgccaatgcctggggaggatcagcagggggaatggccaaggagggccgtaat
caatggaagaaggcagtggttcaggagtctggttggagtgagagttcctggggtggtgaa
gactggtcagctggttctgtggatctgcaggcatctgtttggaaagggaaggaatccccc
attgttgcttctgtaaaccgatggaatgttttagagcctgaattggtttcaagctcatct
acctcttctgtcaaaaccgaggattccggaaaaagagtgggaaatcaatctgtgcccggt
ttggaaccaagttcaagtcattctaattcagcagagacagaaggagatacaagcgaagca
gatgcatcagaagtagtagatgactgggaaaaggcttatgaattctcctttggggtgttt
aagttcacgaataatcctattaaagtcaattgcttcatcacctgggttaaagacctagcc
caggttattggagctcttgcgcatacttttggttggaaagagacatggaggcatacattc
cttttggcatttcaaagcctcggaatagtttatggtcgcttgagtactgctccactatat
gtatttatgtcaattccaagagaggatataatatcagaacagagggtatatgagctcttc
tcctttgtgttctggactatgaccatcattcctctactgaagtatgccttcatagtattg
agagctgatgacaatggagagggtggtacttttgctttatactcattgctttgccggcat
gccaaagtgggtctgcatccaaatgatagaagtgctaatgaagttatgaaaagcataagt
gcacctgcttctaagaccaaggtggaatcaagagccagaagggccattgaaaaacataaa
agcagtcactatttgatgttgtttttggctctgttcgggtcttgcatggtgattggcgat
ggggtactgaccccagctatttctgtgttatcagcttcatcaggatttgaacgatcgatg
tctcatatagctcataaaattgcctcctcacaaagagtgggggacgacatagaaaaagcc
ttcaaaagatatgttccggtcccctttgcatgtgctatattggtaggccttttcacactg
caacactatgggactcataaaattgggtttttatttgcaccgatcattgttatttggctc
ttcttcatcagcggggtgggtttatacaatatcttttattcggaccatcaaatcatctat
gcagtctccccagtatacatgtacagatttatgaggaacttcgaccatcaaggttggagg
tcattaggcagcatccttctatctgtagcaggatcagaggctatgtttgcagatcttggc
catttctcaaagaaatcactgaagattacttttgtctgcttgatttatccagccctgatt
ttatgttatgcgggtcaagctgcatttatctccaaaaactggcgtgtgtttgaagatgtt
acttatcttagtgaatcagtacctggagcctttcttcgccatattgtcgtattgttgtct
cttcttgcttctgctgttggaagccaagcaaccattactgccagtttctctgtcataaac
cagtgcctggcactcggttgttttcccagagtaaaagttattcatacatcagatactatg
aatgggcgggtttatattccagatgtcaactggttattgatgattctcagccttggcatt
gtaatagctttccaagacattgcacgaattggaaatgcaacaggtctagctataatttct
ggaatgctagtaaccacttgtctgatgtcgcttgtaatcacattgtactgggagaagagt
ctgtttgtctctgcatgctttttattatcttttggcttggttgagataatgtatctgtca
gcatgtatgtcaaactttcacaagggagcatggtatctagttgttcttttcgtattttcc
atgacaatcatgctttcatggcactatggcaccatgaagaagtatgagtttgatttacag
aataaggtgtccatggaatggattacagtgatgagccctggtcttggggtctccagggtc
cctggaattggcttcatctacactgatattgtgtcaggaatcccagcttttttctcccac
ttcattacaaatcttcctgcatatcaccaagtgctgatctttgtgtcattcaagtcctta
ccagtgccttgtgtcccccaaaagcagaggtatctcatagggaggcttggcgccaaggac
tataaagtttaccgatgtattgtaagatatggatactgtgataacatcagggacacagat
gattttgaggatcagattatccgttgtattggagaattcattgctttggaagaaaatgat
ttggaatccttgacctccccagaaggaagaatgattgttgttggaaacccaatgctggat
ggaaatgccttggttcccatccctgaaatgaactcaaatttggcctctccaaggttgtca
aacaatggaactcagagaaccctgtctagtgattcaattgagagtgcatctgctcttgtc
acaagaagaaaggtcagattcatgttgcctccagagagccccagaatgcaggtttctgtc
agggcagaactccgagaactagttgatgccagggagagcggcactgcatatttcttgggc
cagtcacatctgaaagtgcgtgatggctcaagctttctgaagagattcctgatcatgacc
tatgtttttcttgataagaattgccgtgagcctccggtagcactcaacattcctcatgct
gctcttgtagaggttggtatggtctataccatatga
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integrated database retrieval system
