Vitis vinifera (wine grape): 100268141
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Entry
100268141 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100268141 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03015
mRNA surveillance pathway
vvi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100268141
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100268141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100268141
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
100268141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
100268141
NCBI-ProteinID:
XP_002282072
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Position
1:complement(join(6736864..6738821,6739408..6739420))
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AA seq
656 aa
AA seq
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MVLRAYMDPMAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNV
GEGFLQMHRSEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNPHF
HEKKEGPMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEP
SDVHGKIANESTPVLNSGTGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRPAVDNGATML
FVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMN
GYIFNGRACVVAFASPQTLKQMGASYMNKTQAQSQSQGRRPMNDGVGRGGGMNMQGGDAG
RNYGRGGWGRGGQGILNRGPGGGGPMRGRGGAVGAKNMVGNTAGVGASGGGYGQGLAGPT
FGGPAGGLMHPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHV
NPAFFGRGMAANGMGMMGATGMDGHHAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASD
YGYGEVNHEKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDG
YRDHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLPSE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggttttacgagcctacatggatccaatggctgaagagcaattagattatgaagatgag
gaatatggaggggctcagaagatgccatttcagggaggtggagccatttctgcacttgca
gatgatgagctgatgggggaagacgatgaatatgatgatctttacaatgatgttaatgtt
ggagagggttttctgcagatgcaccgatctgaagcaccagcaccatcaggtgttatggct
ggtgggccgttccaagctcataaaaccgatgtcccaccacaaaaactagaagctggcact
tcacaggggctgatcatcccaggagtttcaattgaagggaagtattctaatccccatttc
catgagaagaaggaagggccaatggctgttaaggggccggaaatgggatctactagccac
ttagatgggccttcagtttcacagaagggaagggttttggagatgactcatgatactcaa
gtcagaaatttgggatttcaaggatcgactccaattccccaaaagactggggctgaacca
agtgatgtgcatggaaaaattgctaatgagtccacaccagtcctgaattctggaactggt
ggtcctagagctgttccacagatgttgagtaaccaaatgggaatgaatgtgaatgtgaac
cgtccaatggttaatgaaaatcaaatccggccagctgtggataatggtgcaaccatgctc
tttgtaggagaactacattggtggacaactgatgcagaacttgaaagtgtgttatctcaa
tatggaagggtgaaggagattaagttctttgatgagagagctagtggtaaatccaaaggc
tattgtcaagttgagttctatgatgcttctgctgcagccgcatgtaaagaaggaatgaat
ggttatattttcaatggccgagcttgtgtggtagcctttgcttctccacagactttgaag
cagatgggagcttcttatatgaacaaaactcaagcccaatctcagtctcagggaaggagg
cctatgaatgatggggtgggaagaggtggtgggatgaatatgcaaggaggagatgccggg
aggaactatggaagaggtggttggggccgtggagggcagggaatactcaacagaggccct
gggggtggaggaccaatgaggggaagagggggtgctgtgggagcaaagaacatggttgga
aacactgctggtgttggtgccagtggaggagggtatgggcaaggtcttgcaggtcccaca
tttggaggtcctgctggtggtttgatgcatcctcagggtatgatgggttctggatttgat
ccaacatatatgggtcgaggaggtgcttatggagggttctctggttctgcttttcctggg
atggtaccttcatttccagctgttaatacaatgggacttgcaggggtggcccctcatgtc
aaccctgccttctttggccggggaatggcagccaatggaatgggaatgatgggtgctact
ggaatggatgggcaccatgcaggaatgtggactgacacgagtatgggtggatggggagga
gaggaacatggccgaaggactagggagtcaagttatggtggagatgatggtgcttctgac
tatgggtatggagaggtgaaccatgaaaaagttggaaggtcaaatactgcctcccgggaa
aaggaaaggggttctgagcgtgactggtcagggaactctgagagaaggcatcgtgatgag
agggagcaagactgggagaggtcagataaggatcacaggtaccgggaagaaaaagatgga
tatcgtgaccatcgacaacgtgaacgtgacttcaataatgaggatgattgggacagagga
caatcttcttcgagatctcggagcaggtcccgggctgtggcagatgaagatcataggtct
cgctcaagggatggtgattatgggaagaggagacgcttgccatcagagtga
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